RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 IVNS1ABPQ9Y6Y0 642 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 MYH7BA7E2Y1 1941 aa12.05□□□□□ -0.48
LEMD3-202ENST00000539442 DNAJC25-GNG10A0A024R161 153 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 VWA3AA6NCI4 1184 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 MEIS1O00470 390 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 MARCH6O60337 910 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 NR3C2P08235 984 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 MAP2K2P36507 400 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 UBXN2AP68543 259 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 WDR78Q5VTH9 848 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 SHC4Q6S5L8 630 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 VSIG10LQ86VR7 867 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 FSIP1Q8NA03 581 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 IL31RAQ8NI17 732 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 FAM20AQ96MK3 541 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 ZIC5Q96T25 663 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 FAM13BQ9NYF5 915 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 CPA4Q9UI42 421 aa12.04□□□□□ -0.48
LEMD3-202ENST00000539442 MAFGO15525 162 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 AOC2O75106 756 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 ITGB5P18084 799 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 EDNRBP24530 442 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 TXLNAP40222 546 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 MRPS9P82933 396 aaKnown RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 CNTN2Q02246 1040 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 GRIN1Q05586 938 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 CRHR2Q13324 411 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 GRB14Q14449 540 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 PDIA5Q14554 519 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 IL17AQ16552 155 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 GPR142Q7Z601 462 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 PLEKHH3Q7Z736 793 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 IGSF22Q8N9C0 903 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 HAS1Q92839 578 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 SYAP1Q96A49 352 aaPredicted RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 GPRASP2Q96D09 838 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 INPP4AQ96PE3 977 aaPredicted RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 PURBQ96QR8 312 aaKnown RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 PYM1Q9BRP8 204 aaKnown RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 DDX19AQ9NUU7 478 aaKnown RBP12.03□□□□□ -0.48
LEMD3-202ENST00000539442 HPSEQ9Y251 543 aa12.03□□□□□ -0.48
LEMD3-202ENST00000539442 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 SLC15A5A6NIM6 579 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 MSH4O15457 936 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
LEMD3-202ENST00000539442 PFKFB1P16118 471 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 LIG1P18858 919 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 ADORA2AP29274 412 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 TXKP42681 527 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 MTMR1Q13613 665 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 STXBP2Q15833 593 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 CYP2W1Q8TAV3 490 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 CDHR1Q96JP9 859 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 R3HDMLQ9H3Y0 253 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 GOLPH3LQ9H4A5 285 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 TTC12Q9H892 705 aaPredicted RBP12.02□□□□□ -0.49
LEMD3-202ENST00000539442 PCDHA12Q9UN75 941 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 ASTN1O14525 1302 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 ZNF236Q9UL36 1845 aa12.02□□□□□ -0.49
LEMD3-202ENST00000539442 THSD7BQ9C0I4 1608 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 A0A1B0GVL5 298 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 ASB14A6NK59 587 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 SLC26A4O43511 780 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 NR1I2O75469 434 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 EIF3JO75822 258 aaKnown RBP12.01□□□□□ -0.49
LEMD3-202ENST00000539442 TECP42680 631 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 SYKP43405 635 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 NDUFA8P51970 172 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
LEMD3-202ENST00000539442 FMR1NBQ8N0W7 255 aaPredicted RBP12.01□□□□□ -0.49
LEMD3-202ENST00000539442 MORC4Q8TE76 937 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 SYMPKQ92797 1274 aaKnown RBP12.01□□□□□ -0.49
LEMD3-202ENST00000539442 SLC5A5Q92911 643 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 FGD4Q96M96 766 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 RIT2Q99578 217 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 ZNF577Q9BSK1 485 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 WDR11Q9BZH6 1224 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 CCSER1Q9C0I3 900 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 KCNH7Q9NS40 1196 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 SLC5A4Q9NY91 659 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 DACT1Q9NYF0 836 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
LEMD3-202ENST00000539442 DIS3Q9Y2L1 958 aaKnown RBP12.01□□□□□ -0.49
LEMD3-202ENST00000539442 LCTP09848 1927 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 IPO5O00410 1097 aaKnown RBP12□□□□□ -0.49
LEMD3-202ENST00000539442 KINO60870 393 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms