RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 SEPT8Q92599 483 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 APPBP2Q92624 585 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 WNT8BQ93098 351 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 IL17RAQ96F46 866 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 C11orf84Q9BUA3 381 aaPredicted RBP14.2□□□□□ -0.14
YBX3-207ENST00000539204 IFIH1Q9BYX4 1025 aaKnown RBP14.2□□□□□ -0.14
YBX3-207ENST00000539204 TLR9Q9NR96 1032 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 IL17RBQ9NRM6 502 aa14.2□□□□□ -0.14
YBX3-207ENST00000539204 RIF1Q5UIP0 2472 aaKnown RBP14.2□□□□□ -0.14
YBX3-207ENST00000539204 TSPY2A6NKD2 308 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 LOC730098B7Z3J9 87 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 GRM6O15303 877 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
YBX3-207ENST00000539204 HMMRO75330 724 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 EYA4O95677 639 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 NDUFV1P49821 464 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 NUBP1P53384 320 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 VCPP55072 806 aaKnown RBP14.19□□□□□ -0.14
YBX3-207ENST00000539204 SYDE2Q5VT97 1194 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 TRPC6Q9Y210 931 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 RWDD3Q9Y3V2 267 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 LCTP09848 1927 aa14.19□□□□□ -0.14
YBX3-207ENST00000539204 HAS3O00219 553 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 LINC01565O15544 149 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 TBX10O75333 385 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 GTF2F1P35269 517 aaKnown RBP eCLIP14.18□□□□□ -0.14
YBX3-207ENST00000539204 LAMC2Q13753 1193 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 CBX2Q14781 532 aaPredicted RBP14.18□□□□□ -0.14
YBX3-207ENST00000539204 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 PPP2R3CQ969Q6 453 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 FSD1Q9BTV5 496 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
YBX3-207ENST00000539204 MICAL3Q7RTP6 2002 aa14.18□□□□□ -0.14
YBX3-207ENST00000539204 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.17□□□□□ -0.14
YBX3-207ENST00000539204 NMT2O60551 498 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 F2P00734 622 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 ZFYP08048 801 aaPredicted RBP14.17□□□□□ -0.14
YBX3-207ENST00000539204 ID4P47928 161 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 PPARAQ07869 468 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 STXBP2Q15833 593 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 ASCL5Q7RTU5 278 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 SERINC5Q86VE9 423 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 KBTBD3Q8NAB2 608 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 EMID1Q96A84 441 aaPredicted RBP14.17□□□□□ -0.14
YBX3-207ENST00000539204 ASIC4Q96FT7 647 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 MSLNLQ96KJ4 702 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
YBX3-207ENST00000539204 PPFIA4O75335 1185 aa14.16□□□□□ -0.14
YBX3-207ENST00000539204 ZNF286BP0CG31 522 aa14.16□□□□□ -0.14
YBX3-207ENST00000539204 RRP1P56182 461 aaKnown RBP14.16□□□□□ -0.14
YBX3-207ENST00000539204 PPTC7Q8NI37 304 aa14.16□□□□□ -0.14
YBX3-207ENST00000539204 NSUN6Q8TEA1 469 aaKnown RBP14.16□□□□□ -0.14
YBX3-207ENST00000539204 APBB2Q92870 758 aa14.16□□□□□ -0.14
YBX3-207ENST00000539204 RPGRIP1Q96KN7 1286 aa14.16□□□□□ -0.14
YBX3-207ENST00000539204 PHF7Q9BWX1 381 aaPredicted RBP14.16□□□□□ -0.14
YBX3-207ENST00000539204 NAPBQ9H115 298 aa14.16□□□□□ -0.14
YBX3-207ENST00000539204 DCHS1Q96JQ0 3298 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 PRR23AA6NEV1 266 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 M0R2C6 588 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
YBX3-207ENST00000539204 CSPG5O95196 566 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 COASYQ13057 564 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 HIC1Q14526 733 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 SMRP1Q8NCR6 262 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 ATP6V0A1Q93050 837 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 IWS1Q96ST2 819 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 INCENPQ9NQS7 918 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 CLEC1BQ9P126 229 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 FAM186AA6NE01 2351 aa14.15□□□□□ -0.14
YBX3-207ENST00000539204 FRMPD2Q68DX3 1309 aaPredicted RBP14.15□□□□□ -0.15
YBX3-207ENST00000539204 C17orf102A2RUQ5 167 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
YBX3-207ENST00000539204 KDM4AO75164 1064 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 MMP1P03956 469 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 ICAM3P32942 547 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 NOVP48745 357 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 EFHBQ8N7U6 833 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 CLP1Q92989 425 aaKnown RBP14.14□□□□□ -0.15
YBX3-207ENST00000539204 RIPOR3Q96MK2 946 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 TAAR1Q96RJ0 339 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 MAF1Q9H063 256 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 PLAGL2Q9UPG8 496 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 MRVI1Q9Y6F6 885 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
YBX3-207ENST00000539204 MYH7P12883 1935 aa14.13□□□□□ -0.15
YBX3-207ENST00000539204 EIF3JO75822 258 aaKnown RBP14.13□□□□□ -0.15
YBX3-207ENST00000539204 NBL1P41271 181 aa14.13□□□□□ -0.15
YBX3-207ENST00000539204 CAMK1Q14012 370 aa14.13□□□□□ -0.15
YBX3-207ENST00000539204 USH1GQ495M9 461 aa14.13□□□□□ -0.15
YBX3-207ENST00000539204 SIRT2Q8IXJ6 389 aa14.13□□□□□ -0.15
YBX3-207ENST00000539204 ECHDC1Q9NTX5 307 aa14.13□□□□□ -0.15
YBX3-207ENST00000539204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
YBX3-207ENST00000539204 USP15Q9Y4E8 981 aaPredicted RBP14.13□□□□□ -0.15
YBX3-207ENST00000539204 CAND2O75155 1236 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 CTSHP09668 335 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 LINC00271P0C7V0 271 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 TOP1P11387 765 aaKnown RBP14.12□□□□□ -0.15
YBX3-207ENST00000539204 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms