RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 TBCKQ8TEA7 893 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 ERGIC2Q96RQ1 377 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 L1RE1Q9UN81 338 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 EIF3CLB5ME19 914 aaKnown RBP16.19■□□□□ 0.18
CDCA3-207ENST00000538862 KRT86O43790 486 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 TECP42680 631 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
CDCA3-207ENST00000538862 PRAMEF18Q5VWM3 479 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 PAPD7Q5XG87 772 aaKnown RBP16.19■□□□□ 0.18
CDCA3-207ENST00000538862 REXO1Q8N1G1 1221 aaKnown RBP16.19■□□□□ 0.18
CDCA3-207ENST00000538862 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 PIGSQ96S52 555 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 EIF3CQ99613 913 aaKnown RBP16.19■□□□□ 0.18
CDCA3-207ENST00000538862 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
CDCA3-207ENST00000538862 STK17AQ9UEE5 414 aa16.19■□□□□ 0.18
CDCA3-207ENST00000538862 CNTNAP1P78357 1384 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 RASSF10A6NK89 507 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
CDCA3-207ENST00000538862 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDCA3-207ENST00000538862 RBM5P52756 815 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDCA3-207ENST00000538862 RHBDL3P58872 404 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 DLGAP5Q15398 846 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 WDR93Q6P2C0 686 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 SV2BQ7L1I2 683 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 ZBED3Q96IU2 234 aaPredicted RBP16.18■□□□□ 0.18
CDCA3-207ENST00000538862 RPGRIP1Q96KN7 1286 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 MTMR9Q96QG7 549 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
CDCA3-207ENST00000538862 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 GAKO14976 1311 aa16.18■□□□□ 0.18
CDCA3-207ENST00000538862 PVALEFA0A1B0GWK0 134 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 IPO7O95373 1038 aaKnown RBP16.17■□□□□ 0.18
CDCA3-207ENST00000538862 MTIF2P46199 727 aaKnown RBP16.17■□□□□ 0.18
CDCA3-207ENST00000538862 GRM1Q13255 1194 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 MIIPQ5JXC2 388 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 FKBP15Q5T1M5 1219 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 KIAA1328Q86T90 577 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 CDCA5Q96FF9 252 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 NHEJ1Q9H9Q4 299 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-207ENST00000538862 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 AGPAT5Q9NUQ2 364 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 ABCB11O95342 1321 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 CLRN2A0PK11 232 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 EIF3JO75822 258 aaKnown RBP16.17■□□□□ 0.18
CDCA3-207ENST00000538862 RHOXF2BP0C7M4 288 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 FCER1AP12319 257 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 VEGFBP49765 207 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 JAKMIP2Q96AA8 810 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 PRMT6Q96LA8 375 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-207ENST00000538862 RHOXF2Q9BQY4 288 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 BIN2Q9UBW5 565 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-207ENST00000538862 TRIM10Q9UDY6 481 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 SAR1BQ9Y6B6 198 aa16.17■□□□□ 0.18
CDCA3-207ENST00000538862 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 FGFR1OPO95684 399 aaKnown RBP16.16■□□□□ 0.18
CDCA3-207ENST00000538862 GRB10Q13322 594 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 PDIA5Q14554 519 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 TMEM266Q2M3C6 531 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 DEFB115Q30KQ5 88 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 NCAPH2Q6IBW4 605 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 UNC13DQ70J99 1090 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 POTEDQ86YR6 584 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 TXLNBQ8N3L3 684 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 KIAA0895Q8NCT3 520 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 RAB34Q9BZG1 259 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 VAT1LQ9HCJ6 419 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 ZCCHC17Q9NP64 241 aaKnown RBP16.16■□□□□ 0.18
CDCA3-207ENST00000538862 PSD3Q9NYI0 1048 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 PITPNM2Q9BZ72 1349 aa16.16■□□□□ 0.18
CDCA3-207ENST00000538862 ANO9A1A5B4 782 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 PDHBP11177 359 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 MCM3P25205 808 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 HNRNPH3P31942 346 aaKnown RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 VSNL1P62760 191 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 CALCRLQ16602 461 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 ASPRV1Q53RT3 343 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 SAPCD2Q86UD0 394 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 NOA1Q8NC60 698 aaKnown RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 TSGA10Q9BZW7 698 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 SEMA6BQ9H3T3 888 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 BLOC1S4Q9NUP1 217 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 LRWD1Q9UFC0 647 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 TLL2Q9Y6L7 1015 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 FOCADQ5VW36 1801 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 ERICH4A6NGS2 130 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 TXKP42681 527 aa16.15■□□□□ 0.18
CDCA3-207ENST00000538862 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
CDCA3-207ENST00000538862 CYP4F22Q6NT55 531 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms