RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ZNF844Q08AG5 666 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 NAB2Q15742 525 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 TLDC1Q6P9B6 456 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 SH3GLB2Q9NR46 395 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 TMEM59LQ9UK28 342 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 PCDHGC5Q9Y5F6 944 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 FLT1P17948 1338 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 RREB1Q92766 1687 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 EP400Q96L91 3159 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 CCDC194A0A1B0GVG4 234 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 SNAP23O00161 211 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 FTCDO95954 541 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 ECHS1P30084 290 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 CTNNA1P35221 906 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 PRPHP41219 470 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 DNA2P51530 1060 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 NKX1-1Q15270 411 aaPredicted RBP20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 TDRD12Q587J7 1177 aaKnown RBP20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 GKAP1Q5VSY0 366 aaPredicted RBP20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 CACNA2D4Q7Z3S7 1137 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 KIAA0895Q8NCT3 520 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 TATDN2Q93075 761 aa20.46■□□□□ 0.87
SFSWAP-207ENST00000538548 DNAJC8O75937 253 aaPredicted RBP20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 GHRP10912 638 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 IBSPP21815 317 aaPredicted RBP20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 ERVK-9P63128 1117 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 BYSLQ13895 437 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 UAP1Q16222 522 aaPredicted RBP20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 AGBL2Q5U5Z8 902 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 GPIHBP1Q8IV16 184 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 AK8Q96MA6 479 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 ZPR1O75312 459 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 TMOD1P28289 359 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 BCAMP50895 628 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 CLNS1AP54105 237 aaKnown RBP20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 SLC9C1Q4G0N8 1177 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 TMC4Q7Z404 712 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 CABP7Q86V35 215 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 FMNL3Q8IVF7 1028 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 TBC1D22AQ8WUA7 517 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 KDM4CQ9H3R0 1056 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
SFSWAP-207ENST00000538548 MYH1P12882 1939 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 CYP2D7A0A087X1C5 515 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 FGFR1OPO95684 399 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 AMPD3Q01432 767 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 ODF2Q5BJF6 829 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 OR2W6PQ8NHA6 318 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 RASGRP4Q8TDF6 673 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 CCT6BQ92526 530 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 CES2O00748 559 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 PPP1R12AO14974 1030 aaPredicted RBP20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 E2F5Q15329 346 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 KLHL7Q8IXQ5 586 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 RAPGEF5Q92565 580 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 BRIP1Q9BX63 1249 aa20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 NUCKS1Q9H1E3 243 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-207ENST00000538548 M0R2N6 131 aa20.43■□□□□ 0.86
SFSWAP-207ENST00000538548 EHHADHQ08426 723 aa20.43■□□□□ 0.86
SFSWAP-207ENST00000538548 MTMR3Q13615 1198 aa20.43■□□□□ 0.86
SFSWAP-207ENST00000538548 SYN2Q92777 582 aaPredicted RBP20.43■□□□□ 0.86
SFSWAP-207ENST00000538548 HVCN1Q96D96 273 aa20.43■□□□□ 0.86
SFSWAP-207ENST00000538548 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
SFSWAP-207ENST00000538548 SERPING1P05155 500 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 KLRC1P26715 233 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 KIF5BP33176 963 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 RNASE9P60153 205 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 ABCA3Q99758 1704 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 BAZ2AQ9UIF9 1905 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 RTN2O75298 545 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 PAX7P23759 505 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 STAG2Q8N3U4 1231 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 GPKOWQ92917 476 aaPredicted RBP eCLIP20.42■□□□□ 0.868e-8■■■■■ 30.4
SFSWAP-207ENST00000538548 TRIM6Q9C030 488 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 SLC39A2Q9NP94 309 aa20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 CNOT8Q9UFF9 292 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 PACSIN2Q9UNF0 486 aaPredicted RBP20.42■□□□□ 0.86
SFSWAP-207ENST00000538548 SLC8A3P57103 927 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 PPP2R5AQ15172 486 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 INF2Q27J81 1249 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 LRCH2Q5VUJ6 765 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 CPLX4Q7Z7G2 160 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 DNAJC10Q8IXB1 793 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 TAF4BQ92750 862 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 BCCIPQ9P287 314 aaKnown RBP eCLIP20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 SWAP70Q9UH65 585 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 PCDHA6Q9UN73 950 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 PCDHA8Q9Y5H6 950 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 OPLAHO14841 1288 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 ORC4O43929 436 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 NMT2O60551 498 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 SFMBT2Q5VUG0 894 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 MSL1Q68DK7 614 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 HPS3Q969F9 1004 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 CEP72Q9P209 647 aa20.41■□□□□ 0.86
SFSWAP-207ENST00000538548 BHMG1C9JSJ3 638 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 NEBLO76041 1014 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms