RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FAM160B2Q86V87 743 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 GPC2Q8N158 579 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 TSC1Q92574 1164 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 DUSP9Q99956 384 aaKnown RBP15.79■□□□□ 0.12
ACTN1-205ENST00000538545 RNF225M0QZC1 329 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-205ENST00000538545 SPATA31C1P0DKV0 1188 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-205ENST00000538545 SCYL3Q8IZE3 742 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 PIGOQ8TEQ8 1089 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 SSC5DA1L4H1 1573 aa15.79■□□□□ 0.12
ACTN1-205ENST00000538545 PIK3CDO00329 1044 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 FOSP01100 380 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-205ENST00000538545 TTI2Q6NXR4 508 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 CLEC4DQ8WXI8 215 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 DNAJC19Q96DA6 116 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 SEMA6BQ9H3T3 888 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 CUEDC2Q9H467 287 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 IMPACTQ9P2X3 320 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 SYNPO2Q9UMS6 1093 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 MRPL11Q9Y3B7 192 aaKnown RBP15.78■□□□□ 0.12
ACTN1-205ENST00000538545 N4BP3O15049 544 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 WDR46O15213 610 aaKnown RBP15.78■□□□□ 0.12
ACTN1-205ENST00000538545 ICAM1P05362 532 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 PLA2G4BP0C869 781 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 Q4G0T1 1027 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 TCP11X2Q5H9J9 407 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 E4F1Q66K89 784 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-205ENST00000538545 SPECC1LQ69YQ0 1117 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 GPIHBP1Q8IV16 184 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 KLRG1Q96E93 195 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 SH2D3AQ9BRG2 576 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 VAV3Q9UKW4 847 aa15.78■□□□□ 0.12
ACTN1-205ENST00000538545 EIF2AK2P19525 551 aaKnown RBP15.77■□□□□ 0.12
ACTN1-205ENST00000538545 BACE1P56817 501 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 GSDMDP57764 484 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 AMPD3Q01432 767 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 NSMFQ6X4W1 530 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 GPBP1Q86WP2 473 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 ZNF592Q92610 1267 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 WDR11Q9BZH6 1224 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 PICK1Q9NRD5 415 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 STK17AQ9UEE5 414 aa15.77■□□□□ 0.12
ACTN1-205ENST00000538545 SFI1A8K8P3 1242 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 PSMA7O14818 248 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 ITGB5P18084 799 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 RBL2Q08999 1139 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 ARSHQ5FYA8 562 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 NELFCDQ8IXH7 590 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 CSGALNACT2Q8N6G5 542 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 TC2NQ8N9U0 490 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 ZNF280CQ8ND82 737 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 SLC38A10Q9HBR0 1119 aa15.77■□□□□ 0.11
ACTN1-205ENST00000538545 RSPH10B2B2RC85 870 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 RSPH10BP0C881 870 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 CIITAP33076 1130 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 COPB1P53618 953 aaKnown RBP15.76■□□□□ 0.11
ACTN1-205ENST00000538545 MTF1Q14872 753 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 SLFN12Q8IYM2 578 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 TAAR1Q96RJ0 339 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 WRAP73Q9P2S5 460 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-205ENST00000538545 RPS6P62753 249 aaKnown RBP15.76■□□□□ 0.11
ACTN1-205ENST00000538545 COASYQ13057 564 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 LRCH2Q5VUJ6 765 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 DCAF15Q66K64 600 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 UNC13DQ70J99 1090 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 P2RX5Q93086 422 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 COL11A1P12107 1806 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-205ENST00000538545 SORBS3O60504 671 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 CYP11B2P19099 503 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 KLK7P49862 253 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-205ENST00000538545 TPH2Q8IWU9 490 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 LPAR1Q92633 364 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 EIF2AK1Q9BQI3 630 aaKnown RBP15.76■□□□□ 0.11
ACTN1-205ENST00000538545 BHMT2Q9H2M3 363 aa15.76■□□□□ 0.11
ACTN1-205ENST00000538545 CASP14P31944 242 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 FXR1P51114 621 aaKnown RBP eCLIP15.75■□□□□ 0.11
ACTN1-205ENST00000538545 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 C9orf131Q5VYM1 1079 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 APOBEC3FQ8IUX4 373 aaKnown RBP15.75■□□□□ 0.11
ACTN1-205ENST00000538545 TMEM139Q8IV31 216 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 CCDC150Q8NCX0 1101 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 DYDC2Q96IM9 177 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 IKZF4Q9H2S9 585 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 MAGEF1Q9HAY2 307 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 DOCK1Q14185 1865 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 VWA5AO00534 786 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 MYCLP12524 364 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-205ENST00000538545 CASP5P51878 434 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 PLS1Q14651 629 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 MOXD1Q6UVY6 613 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 OTOP1Q7RTM1 612 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 DESI2Q9BSY9 194 aa15.75■□□□□ 0.11
ACTN1-205ENST00000538545 A0A0U1RQJ8 604 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 B4DLN1 442 aa15.74■□□□□ 0.11
ACTN1-205ENST00000538545 USP2O75604 605 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 KRT18P05783 430 aaKnown RBP15.74■□□□□ 0.11
ACTN1-205ENST00000538545 MYL1P05976 194 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms