RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 GNAQP50148 359 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 SOGA3Q5TF21 947 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 ARID5AQ03989 594 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 WDR93Q6P2C0 686 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 SECISBP2LQ93073 1101 aaKnown RBP17.11■□□□□ 0.33
CDH20-203ENST00000538374 ZDHHC15Q96MV8 337 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 C7orf25Q9BPX7 421 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 C6orf50Q9HD87 102 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 FEZ2Q9UHY8 353 aaPredicted RBP17.11■□□□□ 0.33
CDH20-203ENST00000538374 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
CDH20-203ENST00000538374 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 EIF3CLB5ME19 914 aaKnown RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 TNNI2P48788 182 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 TUBB2AQ13885 445 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 EIF3CQ99613 913 aaKnown RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 TUBB2BQ9BVA1 445 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 NDST4Q9H3R1 872 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 DEF6Q9H4E7 631 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 SEC63Q9UGP8 760 aaKnown RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 RSPH14Q9UHP6 348 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 PCDHA13Q9Y5I0 950 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 ARFGEF1Q9Y6D6 1849 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 CRKP46108 304 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 RASSF7Q02833 373 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 CALCRLQ16602 461 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 CREG2Q8IUH2 290 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 REXO1Q8N1G1 1221 aaKnown RBP17.1■□□□□ 0.33
CDH20-203ENST00000538374 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
CDH20-203ENST00000538374 AKR1B10O60218 316 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 KIF11P52732 1056 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 DNAJC21Q5F1R6 531 aaKnown RBP17.09■□□□□ 0.33
CDH20-203ENST00000538374 NELFCDQ8IXH7 590 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 SELENOOQ9BVL4 669 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 ZC3H4Q9UPT8 1303 aaKnown RBP17.09■□□□□ 0.33
CDH20-203ENST00000538374 AGPSO00116 658 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 NAP1L1P55209 391 aaKnown RBP17.09■□□□□ 0.33
CDH20-203ENST00000538374 SPA17Q15506 151 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 LRRC31Q6UY01 552 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 GOLGA5Q8TBA6 731 aa17.09■□□□□ 0.33
CDH20-203ENST00000538374 PACSIN2Q9UNF0 486 aaPredicted RBP17.09■□□□□ 0.33
CDH20-203ENST00000538374 BICDL2A1A5D9 508 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 PRPHP41219 470 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 VAV2P52735 878 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 NFIAQ12857 509 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 SNX29Q8TEQ0 813 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 DDX12PQ92771 950 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 SIK3Q9Y2K2 1263 aa17.08■□□□□ 0.33
CDH20-203ENST00000538374 MYO1CO00159 1063 aa17.08■□□□□ 0.32
CDH20-203ENST00000538374 SHMT1P34896 483 aa17.08■□□□□ 0.32
CDH20-203ENST00000538374 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.32
CDH20-203ENST00000538374 AOC3Q16853 763 aa17.08■□□□□ 0.32
CDH20-203ENST00000538374 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.32
CDH20-203ENST00000538374 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.32
CDH20-203ENST00000538374 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
CDH20-203ENST00000538374 LARP4BQ92615 738 aaKnown RBP17.08■□□□□ 0.32
CDH20-203ENST00000538374 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
CDH20-203ENST00000538374 AKR1B1P15121 316 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 CENPPQ6IPU0 288 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 SND1Q7KZF4 910 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDH20-203ENST00000538374 FAM71BQ8TC56 605 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
CDH20-203ENST00000538374 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 SPZ1Q9BXG8 430 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 GBP3Q9H0R5 595 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
CDH20-203ENST00000538374 ESYT3A0FGR9 886 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 GNA11P29992 359 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 SLC1A4P43007 532 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 CNNM4Q6P4Q7 775 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 DEFB132Q7Z7B7 95 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
CDH20-203ENST00000538374 ZFPM1Q8IX07 1006 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 CCDC47Q96A33 483 aaKnown RBP17.07■□□□□ 0.32
CDH20-203ENST00000538374 MTMR9Q96QG7 549 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 ERGIC2Q96RQ1 377 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 BCAS3Q9H6U6 928 aa17.07■□□□□ 0.32
CDH20-203ENST00000538374 PPP1R11O60927 126 aaPredicted RBP17.06■□□□□ 0.32
CDH20-203ENST00000538374 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
CDH20-203ENST00000538374 PDHBP11177 359 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms