RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLPB-208ENST00000538021 HYAL1Q12794 435 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
CLPB-208ENST00000538021 SMAD4Q13485 552 aaKnown RBP13.1□□□□□ -0.31
CLPB-208ENST00000538021 PKN1Q16512 942 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 SEPT8Q92599 483 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 TOP1MTQ969P6 601 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 GPATCH3Q96I76 525 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
CLPB-208ENST00000538021 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
CLPB-208ENST00000538021 F2P00734 622 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
CLPB-208ENST00000538021 NOVP48745 357 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 FOXK2Q01167 660 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 HIC1Q14526 733 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 STXBP2Q15833 593 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 NLRC5Q86WI3 1866 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
CLPB-208ENST00000538021 DDX19BQ9UMR2 479 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 DMDP11532 3685 aa13.09□□□□□ -0.31
CLPB-208ENST00000538021 HAS3O00219 553 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 GRM6O15303 877 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 SORBS3O60504 671 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 TBX10O75333 385 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 PDHBP11177 359 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 MS4A1P11836 297 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 GTF2F1P35269 517 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLPB-208ENST00000538021 RRP12Q5JTH9 1297 aaKnown RBP13.08□□□□□ -0.32
CLPB-208ENST00000538021 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
CLPB-208ENST00000538021 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
CLPB-208ENST00000538021 IL17RAQ96F46 866 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
CLPB-208ENST00000538021 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.07□□□□□ -0.32
CLPB-208ENST00000538021 LINC01565O15544 149 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 RB1P06400 928 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 CTSHP09668 335 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 NDUFV1P49821 464 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 ZXDAP98168 799 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 FBXL6Q8N531 539 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 RGS22Q8NE09 1264 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 SYTL5Q8TDW5 730 aaPredicted RBP13.07□□□□□ -0.32
CLPB-208ENST00000538021 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
CLPB-208ENST00000538021 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 C11orf84Q9BUA3 381 aaPredicted RBP13.07□□□□□ -0.32
CLPB-208ENST00000538021 LMAN2LQ9H0V9 348 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 COL20A1Q9P218 1284 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 ZFHX2Q9C0A1 2572 aaPredicted RBP13.07□□□□□ -0.32
CLPB-208ENST00000538021 ZDBF2Q9HCK1 2354 aa13.07□□□□□ -0.32
CLPB-208ENST00000538021 RALGAPA2Q2PPJ7 1873 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 C17orf102A2RUQ5 167 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 C5orf67F2Z3F1 127 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 CCER2I3L3R5 266 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 EIF2AK2P19525 551 aaKnown RBP13.06□□□□□ -0.32
CLPB-208ENST00000538021 BMPR1AP36894 532 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 ZNF543Q08ER8 600 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 ARHGEF16Q5VV41 709 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 IWS1Q96ST2 819 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 FSD1Q9BTV5 496 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 OSBPL7Q9BZF2 842 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
CLPB-208ENST00000538021 KIAA1217Q5T5P2 1943 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 ORC4O43929 436 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
CLPB-208ENST00000538021 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 VCPP55072 806 aaKnown RBP13.05□□□□□ -0.32
CLPB-208ENST00000538021 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 SPATA33Q96N06 139 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 RWDD3Q9Y3V2 267 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 MYH7BA7E2Y1 1941 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 ATG2AQ2TAZ0 1938 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 COL4A6Q14031 1691 aa13.05□□□□□ -0.32
CLPB-208ENST00000538021 FOXP2O15409 715 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 TREHO43280 583 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 ADAM15Q13444 863 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 HSDL1Q3SXM5 330 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 MCF2L2Q86YR7 1114 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 IRF2BPLQ9H1B7 796 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
CLPB-208ENST00000538021 ALG13Q9NP73 1137 aaKnown RBP13.04□□□□□ -0.32
CLPB-208ENST00000538021 ANAPC4Q9UJX5 808 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 ABCB11O95342 1321 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
CLPB-208ENST00000538021 LOC730098B7Z3J9 87 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 H0Y858 1186 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 GGPS1O95749 300 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms