RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 SCG2P13521 617 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 RPS6P62753 249 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 APOA5Q6Q788 366 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 TMCO3Q6UWJ1 677 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 SORBS3O60504 671 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 PQBP1O60828 265 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 NR3C2P08235 984 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 KCNJ6P48051 423 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 SETQ01105 290 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 PLA2G4DQ86XP0 818 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 MRPS27Q92552 414 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 CFHR5Q9BXR6 569 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 HSPA4P34932 840 aa13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 SHROOM1Q2M3G4 852 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-206ENST00000537971 PLA2G6O60733 806 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 PTGS1P23219 599 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 UBA7P41226 1012 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 C17orf53Q8N3J3 647 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 SPATA33Q96N06 139 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 ZMYND15Q9H091 742 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 TMOD1P28289 359 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 LAMC2Q13753 1193 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 SYCP1Q15431 976 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 Q3C1V9 767 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 TAF3Q5VWG9 929 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 TM6SF1Q9BZW5 370 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 A0A1B0GVL5 298 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 CYB5R4Q7L1T6 521 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 TSPYL1Q9H0U9 437 aa13.66□□□□□ -0.22
TSPAN9-206ENST00000537971 EIF3JO75822 258 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 HOXC6P09630 235 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 UBASH3AP57075 661 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 BFSP2Q13515 415 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 CCDC66A2RUB6 948 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 ERLIN1O75477 346 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 KRT2P35908 639 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 GNG11P61952 73 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 SNW1Q13573 536 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 XRRA1Q6P2D8 792 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 R3HDMLQ9H3Y0 253 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 NRBP2Q9NSY0 501 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 MYH2Q9UKX2 1941 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 DGKDQ16760 1214 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 PPP1R18Q6NYC8 613 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 CMTR1Q8N1G2 835 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 GPKOWQ92917 476 aaPredicted RBP eCLIP13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 SPZ1Q9BXG8 430 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
TSPAN9-206ENST00000537971 SPTLC2O15270 562 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 GAS7O60861 476 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 AP3B2Q13367 1082 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 KIF5CO60282 957 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 ADCYAP1R1P41586 468 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 RCAN1P53805 252 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 PRAMEF19Q5SWL8 479 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 OLFML2BQ68BL8 750 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 LPXNO60711 386 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 STAM2O75886 525 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 TLK2Q86UE8 772 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 TXNRD2Q9NNW7 524 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 SMARCA1P28370 1054 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSPAN9-206ENST00000537971 N4BP3O15049 544 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 STX17P56962 302 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 BMS1Q14692 1282 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 MTFR1Q15390 333 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 FSCN1Q16658 493 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 CEP135Q66GS9 1140 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 MIS18BP1Q6P0N0 1132 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 CACNA2D4Q7Z3S7 1137 aa13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-206ENST00000537971 JMJD4Q9H9V9 463 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms