RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 RALGAPA2Q2PPJ7 1873 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 CFAP54Q96N23 3096 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 MYH8P13535 1937 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.88□□□□□ -0.67
USP28-205ENST00000537706 PLA2G6O60733 806 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 CALML3P27482 149 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 KIAA0753Q2KHM9 967 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 NECTIN4Q96NY8 510 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 PURBQ96QR8 312 aaKnown RBP10.88□□□□□ -0.67
USP28-205ENST00000537706 RTKNQ9BST9 563 aa10.88□□□□□ -0.67
USP28-205ENST00000537706 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP28-205ENST00000537706 TLR7Q9NYK1 1049 aaKnown RBP10.88□□□□□ -0.67
USP28-205ENST00000537706 RIF1Q5UIP0 2472 aaKnown RBP10.87□□□□□ -0.67
USP28-205ENST00000537706 GLP2RO95838 553 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 ICAM1P05362 532 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 RASA1P20936 1047 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 SP100P23497 879 aaPredicted RBP10.87□□□□□ -0.67
USP28-205ENST00000537706 CTR9Q6PD62 1173 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 CHST3Q7LGC8 479 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 POF1BQ8WVV4 589 aa10.87□□□□□ -0.67
USP28-205ENST00000537706 MICAL3Q7RTP6 2002 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 HOXB8P17481 243 aaPredicted RBP10.86□□□□□ -0.67
USP28-205ENST00000537706 ATXN1P54253 815 aaKnown RBP10.86□□□□□ -0.67
USP28-205ENST00000537706 PDE12Q6L8Q7 609 aaKnown RBP10.86□□□□□ -0.67
USP28-205ENST00000537706 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 BORCS6Q96GS4 357 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 GMCL1Q96IK5 515 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 MRS2Q9HD23 443 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 MTMR4Q9NYA4 1195 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 NCDNQ9UBB6 729 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 FBXL21Q9UKT6 434 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 R4GN57 208 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 USP34Q70CQ2 3546 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 WDFY4Q6ZS81 3184 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 TCRBV5S4A2TA0A5A2 114 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 C17orf102A2RUQ5 167 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 ITGB1P05556 798 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 ADRB1P08588 477 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 TECP42680 631 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 LMNB2Q03252 620 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 CES5AQ6NT32 575 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 ANKRD54Q6NXT1 300 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 RNF207Q6ZRF8 634 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 SERINC5Q86VE9 423 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 ATP6V0A1Q93050 837 aa10.86□□□□□ -0.67
USP28-205ENST00000537706 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
USP28-205ENST00000537706 TRIP12Q14669 1992 aaPredicted RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 IGKV6D-41A0A0C4DH26 115 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 GOLIM4O00461 696 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 STK25O00506 426 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 EDNRBP24530 442 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 UBE3AQ05086 875 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 CAMK1Q14012 370 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 CWF19L1Q69YN2 538 aaKnown RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 CMTR2Q8IYT2 770 aaKnown RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 TDRD5Q8NAT2 981 aaKnown RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 WNT8BQ93098 351 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 CEP95Q96GE4 821 aa10.85□□□□□ -0.67
USP28-205ENST00000537706 DNAJC2Q99543 621 aaKnown RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 RNF216Q9NWF9 866 aaPredicted RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 MYO5AQ9Y4I1 1855 aaKnown RBP10.85□□□□□ -0.67
USP28-205ENST00000537706 HAS3O00219 553 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 F2P00734 622 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 CTSHP09668 335 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 SNAP25P60880 206 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 ZNF200P98182 395 aaPredicted RBP10.84□□□□□ -0.67
USP28-205ENST00000537706 ARHGAP1Q07960 439 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 POLA2Q14181 598 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 DUSP6Q16828 381 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 RCSD1Q6JBY9 416 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 AACSQ86V21 672 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 ERC1Q8IUD2 1116 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 STK11IPQ8N1F8 1099 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 NLRC5Q86WI3 1866 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
USP28-205ENST00000537706 ARIH2O95376 493 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 CT47B1P0C2W7 299 aaPredicted RBP10.84□□□□□ -0.67
USP28-205ENST00000537706 LINC00271P0C7V0 271 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 GNAT1P11488 350 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 MCCP23508 829 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 MTHFRP42898 656 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 RARSP54136 660 aaKnown RBP10.84□□□□□ -0.67
USP28-205ENST00000537706 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 SBK1Q52WX2 424 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 ZDHHC14Q8IZN3 488 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 S1PR5Q9H228 398 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 PCDHB12Q9Y5F1 795 aa10.84□□□□□ -0.67
USP28-205ENST00000537706 ZBED9Q6R2W3 1325 aa10.83□□□□□ -0.67
USP28-205ENST00000537706 KMT2BQ9UMN6 2715 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms