RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 STXBP2Q15833 593 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 CCL14Q16627 93 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 XRRA1Q6P2D8 792 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 FSIP1Q8NA03 581 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 USP6NLQ92738 828 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 MAML3Q96JK9 1138 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 BCAS3Q9H6U6 928 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 AGO4Q9HCK5 861 aaKnown RBP17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 FLRT1Q9NZU1 646 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
SFSWAP-206ENST00000537582 MARCH6O60337 910 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 SORBS3O60504 671 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 CYP2B6P20813 491 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 FCGRTP55899 365 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 RESP18Q5W5W9 173 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 SEPT14Q6ZU15 432 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 ARMCX2Q7L311 632 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 NIPA1Q7RTP0 329 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 FBXO16Q8IX29 292 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 SLC5A5Q92911 643 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 ZNF577Q9BSK1 485 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 PLXNA1Q9UIW2 1896 aa17.69■□□□□ 0.42
SFSWAP-206ENST00000537582 DOCK3Q8IZD9 2030 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 A0A1W2PQ27 194 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 A0A1W2PQ64 194 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 A0A1W2PQD8 194 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 DDX39AO00148 427 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 GPR25O00155 361 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 PFKFB1P16118 471 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 PTGS1P23219 599 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 NDUFA8P51970 172 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 DNAJC5GQ8N7S2 189 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 MORC4Q8TE76 937 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 SYMPKQ92797 1274 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 VAV3Q9UKW4 847 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 TELO2Q9Y4R8 837 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 MGAMO43451 1857 aa17.68■□□□□ 0.42
SFSWAP-206ENST00000537582 A0A087X0B3 334 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 IPO5O00410 1097 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 TBX3O15119 743 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 CMA1P23946 247 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 FXR2P51116 673 aaKnown RBP eCLIP17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 SP2Q02086 613 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 SPIRE1Q08AE8 756 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 LRCH2Q5VUJ6 765 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 ZNF579Q8NAF0 562 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 MRPS27Q92552 414 aaKnown RBP17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 NUDT12Q9BQG2 462 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 PANK2Q9BZ23 570 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 PDGFCQ9NRA1 345 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 PCDHA12Q9UN75 941 aa17.67■□□□□ 0.42
SFSWAP-206ENST00000537582 MCM3APO60318 1980 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 SPATA31C2B4DYI2 1134 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 DHX15O43143 795 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 TRAK2O60296 914 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 NR1I2O75469 434 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 PSMD10O75832 226 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 LONP1P36776 959 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 PRKCZQ05513 592 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 NLRX1Q86UT6 975 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 SLFN12Q8IYM2 578 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 IGSF22Q8N9C0 903 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 GPRASP2Q96D09 838 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 FAM20AQ96MK3 541 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 ASB14A6NK59 587 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 EML1O00423 815 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 CHMP2AO43633 222 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 ARIH2O95376 493 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 HOXC6P09630 235 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 KCNA2P16389 499 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 NCAPH2Q6IBW4 605 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 ZNF467Q7Z7K2 595 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 ZNF296Q8WUU4 475 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 SOCS4Q8WXH5 440 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 MMTAG2Q9BU76 263 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 KATNBL1Q9H079 304 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 UNC45AQ9H3U1 944 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 SAGE1Q9NXZ1 904 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 HPSEQ9Y251 543 aa17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 DIS3Q9Y2L1 958 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-206ENST00000537582 GAS7O60861 476 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 STAM2O75886 525 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 RGS2P41220 211 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 FLT3LGP49771 235 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 SNW1Q13573 536 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 TMEM266Q2M3C6 531 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 PRAMEF19Q5SWL8 479 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 MAMDC4Q6UXC1 1216 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 OTOP1Q7RTM1 612 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 PDILTQ8N807 584 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 ENGASEQ8NFI3 743 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 PLIN2Q99541 437 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 APBA2Q99767 749 aa17.65■□□□□ 0.42
SFSWAP-206ENST00000537582 TINF2Q9BSI4 451 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms