RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
CPSF7-217ENST00000537162 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 PRR5-ARHGAP8B1AHC4 643 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 ALAS1P13196 640 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 PMLP29590 882 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 ARHGAP8P85298 464 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 LMNB2Q03252 620 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 KCNC3Q14003 757 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 ANKRD54Q6NXT1 300 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 LRSAM1Q6UWE0 723 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 CERS3Q8IU89 383 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 SIX5Q8N196 739 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 AFG1LQ8WV93 481 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 CCDC17Q96LX7 622 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 TRERF1Q96PN7 1200 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 PLVAPQ9BX97 442 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 GPR108Q9NPR9 543 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 RWDD3Q9Y3V2 267 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 NR2E1Q9Y466 385 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-217ENST00000537162 MRPL42Q9Y6G3 142 aaKnown RBP11.43□□□□□ -0.58
CPSF7-217ENST00000537162 MYH7BA7E2Y1 1941 aa11.43□□□□□ -0.58
CPSF7-217ENST00000537162 RAD50Q92878 1312 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 POTEMA6NI47 508 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 MMP3P08254 477 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 THPOP40225 353 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 TECP42680 631 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 ALDH5A1P51649 535 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-217ENST00000537162 PPP2R5BQ15173 497 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 DUSP6Q16828 381 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 ZC3H14Q6PJT7 736 aaKnown RBP11.42□□□□□ -0.58
CPSF7-217ENST00000537162 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
CPSF7-217ENST00000537162 SEPT8Q92599 483 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 P2RX5Q93086 422 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 ZNF689Q96CS4 500 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-217ENST00000537162 DACH1Q9UI36 760 aa11.42□□□□□ -0.58
CPSF7-217ENST00000537162 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 MAGEB6P1A0A0J9YX57 407 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 C1QTNF9BB2RNN3 333 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 SRGAP3O43295 1099 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 C1QTNF9P0C862 333 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 PDE4BQ07343 736 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 BTG3Q14201 252 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-217ENST00000537162 SPECC1Q5M775 1068 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 NSMFQ6X4W1 530 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 POTEDQ86YR6 584 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 MAML2Q8IZL2 1156 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-217ENST00000537162 LCORLQ8N3X6 602 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 C7orf31Q8N865 590 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
CPSF7-217ENST00000537162 ITPR1Q14643 2758 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 PTPRCP08575 1304 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 WDFY3Q8IZQ1 3526 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPSF7-217ENST00000537162 PRKAB2O43741 272 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 PPFIA3O75145 1194 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 DCNP07585 359 aaKnown RBP11.4□□□□□ -0.58
CPSF7-217ENST00000537162 TXNP10599 105 aaKnown RBP11.4□□□□□ -0.58
CPSF7-217ENST00000537162 PSEN2P49810 448 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 RING1Q06587 406 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 FEZF2Q8TBJ5 459 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 CHMP4CQ96CF2 233 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
CPSF7-217ENST00000537162 FEM1BQ9UK73 627 aa11.4□□□□□ -0.58
CPSF7-217ENST00000537162 DSPP15924 2871 aaKnown RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 KRBA1A5PL33 1030 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 KINO60870 393 aaKnown RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 CTSHP09668 335 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 ERVFC1P60507 584 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 SHC2P98077 582 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 BAATQ14032 418 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 CCDC158Q5M9N0 1113 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 N4BP2L1Q5TBK1 243 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 C16orf86Q6ZW13 317 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 SERINC5Q86VE9 423 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 MEIS3Q99687 375 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 TLR7Q9NYK1 1049 aaKnown RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 LHX6Q9UPM6 363 aa11.39□□□□□ -0.59
CPSF7-217ENST00000537162 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.39□□□□□ -0.59
CPSF7-217ENST00000537162 HAS3O00219 553 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 STK25O00506 426 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 SLC30A4O14863 429 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 NARSO43776 548 aaKnown RBP11.38□□□□□ -0.59
CPSF7-217ENST00000537162 IGSF3O75054 1194 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 DGKIO75912 1065 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 ZNF286BP0CG31 522 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 ARHGAP1Q07960 439 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 MFSD10Q14728 455 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 KIAA0753Q2KHM9 967 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms