RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PTPN18Q99952 460 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 TEX13BQ9BXU2 312 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 HOXC10Q9NYD6 342 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 SERTAD1Q9UHV2 236 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 LRRC37A2A6NM11 1700 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 MCM3APO60318 1980 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 DOCK5Q9H7D0 1870 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 SPDYE3A6NKU9 549 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 GCOM1H8Y6P7 765 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 PIK3CDO00329 1044 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 SERPINC1P01008 464 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 POLR2MP0CAP2 368 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ZBTB48P10074 688 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ZNF18P17022 549 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 HSD17B4P51659 736 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 GTF2A2P52657 109 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ATP2C1P98194 919 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 AP3B2Q13367 1082 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ZNF784Q8NCA9 323 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 GJA10Q969M2 543 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 PPP1R13BQ96KQ4 1090 aa14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 TRMT1Q9NXH9 659 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-202ENST00000536708 PDHXO00330 501 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 FOXN1O15353 648 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 CETPP11597 493 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 IL17AQ16552 155 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 C4orf32Q8N8J7 132 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 IL31RAQ8NI17 732 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 CRYGNQ8WXF5 182 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 SMARCE1Q969G3 411 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 GLT8D2Q9H1C3 349 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 FANCLQ9NW38 375 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ABT1Q9ULW3 272 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ATP2A1O14983 1001 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 FDX1P10109 184 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 YY1P25490 414 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 STAT3P40763 770 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 OAZ1P54368 228 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 RPS6P62753 249 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 ARHGAP4P98171 946 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 TRAF1Q13077 416 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 GRM1Q13255 1194 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 USP49Q70CQ1 688 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 SH3RF1Q7Z6J0 888 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 CCDC34Q96HJ3 373 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 CSRNP2Q9H175 543 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 OGFRQ9NZT2 677 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 TLL2Q9Y6L7 1015 aa14.53□□□□□ -0.08
CDK5RAP3-202ENST00000536708 PLXNA1Q9UIW2 1896 aa14.52□□□□□ -0.08
CDK5RAP3-202ENST00000536708 VWA3AA6NCI4 1184 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 TOMM70O94826 608 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ERCC5P28715 1186 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SREBF1P36956 1147 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 TBX2Q13207 712 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 RGMBQ6NW40 437 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SPATC1LQ9H0A9 340 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 L2HGDHQ9H9P8 463 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 CGNQ9P2M7 1197 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 RBPJLQ9UBG7 517 aa14.52□□□□□ -0.09
CDK5RAP3-202ENST00000536708 FAM86B1E9PN63 330 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 FAM86B2P0C5J1 330 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 CYP2W1Q8TAV3 490 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SYTL5Q8TDW5 730 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ZNF592Q92610 1267 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ERO1AQ96HE7 468 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ZIC5Q96T25 663 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 A1CFQ9NQ94 594 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 INTS13Q9NVM9 706 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ZSWIM8A7E2V4 1837 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 IGF2BP3O00425 579 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SLC10A3P09131 477 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SLFN14P0C7P3 912 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 BAATQ14032 418 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 Q3C1V9 767 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 RNF207Q6ZRF8 634 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SMCR8Q8TEV9 937 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 MOV10L1Q9BXT6 1211 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ACAD9Q9H845 621 aa14.51□□□□□ -0.09
CDK5RAP3-202ENST00000536708 PP2D1A8MPX8 630 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 FAM155AB1AL88 458 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 FOSP01100 380 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 EIF2AK2P19525 551 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 OSBPP22059 807 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 CDC25AP30304 524 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 GHRHRQ02643 423 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 PABPC4Q13310 644 aaKnown RBP eCLIP14.5□□□□□ -0.092e-7■■■□□ 15.2
CDK5RAP3-202ENST00000536708 MB21D1Q8N884 522 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 DDX25Q9UHL0 483 aaKnown RBP14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 DOCK3Q8IZD9 2030 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 CENPFP49454 3210 aa14.5□□□□□ -0.09
CDK5RAP3-202ENST00000536708 TMEM88BA6NKF7 163 aa14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 SLU7O95391 586 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 OR52Z1P0C646 297 aa14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 PAXIP1Q6ZW49 1069 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ANKRD23Q86SG2 305 aa14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 NCAPG2Q86XI2 1143 aa14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 MCF2L2Q86YR7 1114 aa14.49□□□□□ -0.09
CDK5RAP3-202ENST00000536708 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms