RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SASH3O75995 380 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 GYPCP04921 128 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 TUBBP07437 444 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 GTF2E1P29083 439 aaPredicted RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 TXLNAP40222 546 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 ARHGAP25P42331 645 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 USP5P45974 858 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 CRKLP46109 303 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 COPB1P53618 953 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 SMTNP53814 917 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 MTF1Q14872 753 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 PTPN21Q16825 1174 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 SLC10A5Q5PT55 438 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 IFIT1BQ5T764 474 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 ARL6IP4Q66PJ3 421 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 CTR9Q6PD62 1173 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF662Q6ZS27 426 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 FBXO33Q7Z6M2 555 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 IQCA1Q86XH1 822 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 TMTC1Q8IUR5 882 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 CNGA4Q8IV77 575 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 CMTR1Q8N1G2 835 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 SRBD1Q8N5C6 995 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 CEP112Q8N8E3 955 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 C4orf32Q8N8J7 132 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 IQUBQ8NA54 791 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF384Q8TF68 577 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 GTF3C2Q8WUA4 911 aaPredicted RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 SDR42E1Q8WUS8 393 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 VTI1AQ96AJ9 217 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 FUT8Q9BYC5 575 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 PARD6BQ9BYG5 372 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 TUT1Q9H6E5 874 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 MYO1AQ9UBC5 1043 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 SEPT3Q9UH03 358 aa6.45□□□□□ -1.38
VPS33A-203ENST00000536212 TTF2Q9UNY4 1162 aaKnown RBP6.45□□□□□ -1.38
VPS33A-203ENST00000536212 DLEC1Q9Y238 1755 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 A6NJY4 79 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 MINDY4BA8MYZ0 360 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 H7C1D1 291 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 SMIM22K7EJ46 135 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 C21orf2O43822 256 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 PPP1R12BO60237 982 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 KIF5CO60282 957 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ICMTO60725 284 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 PRDM1O75626 825 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 SEC31AO94979 1220 aaKnown RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 IL2RAP01589 272 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 SCG2P13521 617 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ATP2B1P20020 1258 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 LONP1P36776 959 aaKnown RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 CTSOP43234 321 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 AFMP43652 599 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 FXR1P51114 621 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 HSPA2P54652 639 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 STX17P56962 302 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ERVK-24P63145 666 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 DYNLL1P63167 89 aaKnown RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ITPK1Q13572 414 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 KCNB1Q14721 858 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 KARSQ15046 597 aaKnown RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 KRT31Q15323 416 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF174Q15697 407 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 IL17AQ16552 155 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 PFKFB3Q16875 520 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 WHAMMP3Q1A5X7 153 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 HSP90AA4PQ58FG1 418 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 TEX35Q5T0J7 233 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF658Q5TYW1 1059 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 CLEC4GQ6UXB4 293 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 SLC9A9Q8IVB4 645 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ANKRD18AQ8IVF6 992 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 GLYCTKQ8IVS8 523 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 DAGLBQ8NCG7 672 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 CCDC12Q8WUD4 166 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF622Q969S3 477 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 FAM84BQ96KN1 310 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 DESI2Q9BSY9 194 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 ARFGAP3Q9NP61 516 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 SH3GLB2Q9NR46 395 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 BSDC1Q9NW68 430 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 RMND1Q9NWS8 449 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 PSD3Q9NYI0 1048 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 SCHIP1Q9P0W5 487 aaPredicted RBP6.44□□□□□ -1.38
VPS33A-203ENST00000536212 CALCOCO1Q9P1Z2 691 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 CACNA1SQ13698 1873 aa6.44□□□□□ -1.38
VPS33A-203ENST00000536212 COL4A1P02462 1669 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CHD4Q14839 1912 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CYP2D7A0A087X1C5 515 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 LOC102724428A0A0B4J2F2 783 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 A0A0U1RQJ8 604 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 A0A1W2PQC6 194 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CTAGE9A4FU28 777 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 RPN1P04843 607 aaKnown RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 MYL1P05976 194 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CALML3P27482 149 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CASP1P29466 404 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 OAS2P29728 719 aaKnown RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CASP14P31944 242 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 BAG6P46379 1132 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms