RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 ORC2Q13416 577 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-202ENST00000536187 ARL6IP4Q66PJ3 421 aaKnown RBP20.24■□□□□ 0.83
CACNB3-202ENST00000536187 FBXO16Q8IX29 292 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-202ENST00000536187 TTC12Q9H892 705 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-202ENST00000536187 ADD3Q9UEY8 706 aaKnown RBP20.24■□□□□ 0.83
CACNB3-202ENST00000536187 GABRQQ9UN88 632 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 SORBS3O60504 671 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 PRPHP41219 470 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 MTMR1Q13613 665 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 CSPP1Q1MSJ5 1256 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 RESP18Q5W5W9 173 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 DPP9Q86TI2 863 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 FSIP1Q8NA03 581 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 MAML3Q96JK9 1138 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 IWS1Q96ST2 819 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
CACNB3-202ENST00000536187 VAV3Q9UKW4 847 aa20.24■□□□□ 0.83
CACNB3-202ENST00000536187 LAD1O00515 517 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 NDUFA8P51970 172 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 SP2Q02086 613 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 DTHD1Q6ZMT9 781 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 ARMCX2Q7L311 632 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 DNAJC5GQ8N7S2 189 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 JMYQ8N9B5 988 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 LRRC15Q8TF66 581 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 SYMPKQ92797 1274 aaKnown RBP20.23■□□□□ 0.83
CACNB3-202ENST00000536187 FERMT2Q96AC1 680 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
CACNB3-202ENST00000536187 DDX39AO00148 427 aaKnown RBP20.22■□□□□ 0.83
CACNB3-202ENST00000536187 DHX15O43143 795 aaKnown RBP20.22■□□□□ 0.83
CACNB3-202ENST00000536187 NR1I2O75469 434 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 PFKFB1P16118 471 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 CYP2B6P20813 491 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 SP3Q02447 781 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 PDE4DQ08499 809 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 MAP2K5Q13163 448 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 STXBP2Q15833 593 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 IGSF22Q8N9C0 903 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 CD99L2Q8TCZ2 262 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 MORC4Q8TE76 937 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 SLC5A5Q92911 643 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
CACNB3-202ENST00000536187 PANK2Q9BZ23 570 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 A0A1W2PQ27 194 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 A0A1W2PQ64 194 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 A0A1W2PQD8 194 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 IPO5O00410 1097 aaKnown RBP20.22■□□□□ 0.83
CACNB3-202ENST00000536187 PSMD10O75832 226 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 ARIH2O95376 493 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 SNW1Q13573 536 aaKnown RBP20.22■□□□□ 0.83
CACNB3-202ENST00000536187 ZNF577Q9BSK1 485 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 MMTAG2Q9BU76 263 aaKnown RBP20.22■□□□□ 0.83
CACNB3-202ENST00000536187 PDGFCQ9NRA1 345 aa20.22■□□□□ 0.83
CACNB3-202ENST00000536187 GOLGA6L4A6NEF3 574 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 GPR25O00155 361 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 EML1O00423 815 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 EIF3JO75822 258 aaKnown RBP20.21■□□□□ 0.83
CACNB3-202ENST00000536187 SNAI1O95863 264 aaPredicted RBP20.21■□□□□ 0.83
CACNB3-202ENST00000536187 CMA1P23946 247 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 SETQ01105 290 aaPredicted RBP20.21■□□□□ 0.83
CACNB3-202ENST00000536187 NIPA1Q7RTP0 329 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 ENGASEQ8NFI3 743 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 MRPS27Q92552 414 aaKnown RBP20.21■□□□□ 0.83
CACNB3-202ENST00000536187 KATNBL1Q9H079 304 aa20.21■□□□□ 0.83
CACNB3-202ENST00000536187 TRAK2O60296 914 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 FXR2P51116 673 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNB3-202ENST00000536187 PRKCZQ05513 592 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 XRRA1Q6P2D8 792 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 ZNF579Q8NAF0 562 aaKnown RBP20.2■□□□□ 0.82
CACNB3-202ENST00000536187 PCDHA12Q9UN75 941 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 HPSEQ9Y251 543 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 TBX3O15119 743 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 CHMP2AO43633 222 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 MARCH6O60337 910 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 KCNA2P16389 499 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 ECM1Q16610 540 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 LRCH2Q5VUJ6 765 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 PDILTQ8N807 584 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 UNC45AQ9H3U1 944 aa20.2■□□□□ 0.82
CACNB3-202ENST00000536187 SPATA31C2B4DYI2 1134 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 HOXC6P09630 235 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 LONP1P36776 959 aaKnown RBP20.19■□□□□ 0.82
CACNB3-202ENST00000536187 FCGRTP55899 365 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 PRAMEF19Q5SWL8 479 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 B3GNT9Q6UX72 402 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 OTOP1Q7RTM1 612 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 FMR1NBQ8N0W7 255 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-202ENST00000536187 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-202ENST00000536187 FAM20AQ96MK3 541 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 PLIN2Q99541 437 aa20.19■□□□□ 0.82
CACNB3-202ENST00000536187 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-202ENST00000536187 FLT3LGP49771 235 aa20.18■□□□□ 0.82
CACNB3-202ENST00000536187 KARSQ15046 597 aaKnown RBP20.18■□□□□ 0.82
CACNB3-202ENST00000536187 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
CACNB3-202ENST00000536187 SLFN12Q8IYM2 578 aa20.18■□□□□ 0.82
CACNB3-202ENST00000536187 TINF2Q9BSI4 451 aa20.18■□□□□ 0.82
CACNB3-202ENST00000536187 DACT1Q9NYF0 836 aa20.18■□□□□ 0.82
CACNB3-202ENST00000536187 TMEM63CQ9P1W3 806 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms