RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 SPATA31C2B4DYI2 1134 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 FIBPO43427 364 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 SORBS3O60504 671 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 GGPS1O95749 300 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 GNA11P29992 359 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 BMP8BP34820 402 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 SP2Q02086 613 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 NEDD9Q14511 834 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 DGKDQ16760 1214 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 HABP4Q5JVS0 413 aaKnown RBP14.59□□□□□ -0.07
VPS37C-203ENST00000536000 MYSM1Q5VVJ2 828 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 SLC43A3Q8NBI5 491 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
VPS37C-203ENST00000536000 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
VPS37C-203ENST00000536000 ZMYND12Q9H0C1 365 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 TPCN1Q9ULQ1 816 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 GRIN2DO15399 1336 aa14.59□□□□□ -0.07
VPS37C-203ENST00000536000 ESYT2A0FGR8 921 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 KIAA0355O15063 1070 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 PFKFB2O60825 505 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 PPFIA4O75335 1185 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 CDKL5O76039 1030 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 MMP3P08254 477 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 RAG1P15918 1043 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 AP3B2Q13367 1082 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 NBPF20Q3BBV1 942 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 JAKMIP3Q5VZ66 844 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 CCDC148Q8NFR7 591 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 PPTC7Q8NI37 304 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 GPRASP2Q96D09 838 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 CDHR1Q96JP9 859 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 PGBD1Q96JS3 809 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 SPATA33Q96N06 139 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 ANO3Q9BYT9 981 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 UBE2OQ9C0C9 1292 aaKnown RBP14.58□□□□□ -0.08
VPS37C-203ENST00000536000 SH3GLB2Q9NR46 395 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 TMEM260Q9NX78 707 aa14.58□□□□□ -0.08
VPS37C-203ENST00000536000 MAFGO15525 162 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 DEXIO95424 95 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 UBA1P22314 1058 aaKnown RBP14.57□□□□□ -0.08
VPS37C-203ENST00000536000 ZNF76P36508 570 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 NLRP5P59047 1200 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 SCRN1Q12765 414 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 SEMA3FQ13275 785 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 FAM47CQ5HY64 1035 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 CYFIP1Q7L576 1253 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 FAM126BQ8IXS8 530 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 GIMAP8Q8ND71 665 aaPredicted RBP14.57□□□□□ -0.08
VPS37C-203ENST00000536000 BICD2Q8TD16 824 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 BADQ92934 168 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 SENP7Q9BQF6 1050 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 PRO3102Q9H379 93 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 PCDH10Q9P2E7 1040 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 UBIAD1Q9Y5Z9 338 aa14.57□□□□□ -0.08
VPS37C-203ENST00000536000 NOP56O00567 594 aaKnown RBP14.56□□□□□ -0.08
VPS37C-203ENST00000536000 CD4P01730 458 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 CLK2P49760 499 aaKnown RBP14.56□□□□□ -0.08
VPS37C-203ENST00000536000 HSDL1Q3SXM5 330 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 NFRKBQ6P4R8 1299 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 MXRA8Q9BRK3 442 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 TRPV6Q9H1D0 765 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 BCAS3Q9H6U6 928 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 JADE2Q9NQC1 790 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 VPS54Q9P1Q0 977 aa14.56□□□□□ -0.08
VPS37C-203ENST00000536000 A0A1W2PPC1 479 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 TIMP1P01033 207 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 ITGB5P18084 799 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 PTPN11Q06124 597 aaPredicted RBP14.55□□□□□ -0.08
VPS37C-203ENST00000536000 MTMR1Q13613 665 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 ME3Q16798 604 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 METTL7BQ6UX53 244 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 REXO1Q8N1G1 1221 aaKnown RBP14.55□□□□□ -0.08
VPS37C-203ENST00000536000 KAT2BQ92831 832 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 ALG1Q9BT22 464 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 UPF2Q9HAU5 1272 aaKnown RBP14.55□□□□□ -0.08
VPS37C-203ENST00000536000 TBX21Q9UL17 535 aa14.55□□□□□ -0.08
VPS37C-203ENST00000536000 TRIOBPQ9H2D6 2365 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 B4GALT4O60513 344 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 ATP9AO75110 1047 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 ITGB8P26012 769 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 SREBF1P36956 1147 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 PSEN2P49810 448 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 ARHGAP4P98171 946 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 CEP55Q53EZ4 464 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 NECAB1Q8N987 351 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 PPP1R13LQ8WUF5 828 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 KATNAL1Q9BW62 490 aa14.54□□□□□ -0.08
VPS37C-203ENST00000536000 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
VPS37C-203ENST00000536000 CYP3A4P08684 503 aa14.53□□□□□ -0.08
VPS37C-203ENST00000536000 HOXD8P13378 290 aaPredicted RBP14.53□□□□□ -0.08
VPS37C-203ENST00000536000 KCNA2P16389 499 aa14.53□□□□□ -0.08
VPS37C-203ENST00000536000 XBP1P17861 261 aa14.53□□□□□ -0.08
VPS37C-203ENST00000536000 SP4Q02446 784 aa14.53□□□□□ -0.08
VPS37C-203ENST00000536000 MFSD10Q14728 455 aa14.53□□□□□ -0.08
VPS37C-203ENST00000536000 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms