RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 GNAQP50148 359 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 EPHB4P54760 987 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 FOXK1P85037 733 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 EXOSC10Q01780 885 aaKnown RBP10.22□□□□□ -0.77
CHD4-204ENST00000535810 ARHGAP1Q07960 439 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 KRT32Q14532 448 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 C9orf50Q5SZB4 431 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 APOA5Q6Q788 366 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 TMTC3Q6ZXV5 915 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 DHX32Q7L7V1 743 aaKnown RBP10.22□□□□□ -0.77
CHD4-204ENST00000535810 PLPP6Q8IY26 295 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 SAMD3Q8N6K7 520 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 IL31RAQ8NI17 732 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 KCNB2Q92953 911 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 POLR3EQ9NVU0 708 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
CHD4-204ENST00000535810 SCN10AQ9Y5Y9 1956 aa10.22□□□□□ -0.77
CHD4-204ENST00000535810 KIAA1217Q5T5P2 1943 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 TLR3O15455 904 aaKnown RBP10.21□□□□□ -0.77
CHD4-204ENST00000535810 RGS20O76081 388 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 TIMP1P01033 207 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 MYL3P08590 195 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 HSPA4P34932 840 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 FPGSQ05932 587 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 PGM5Q15124 567 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 SHHQ15465 462 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 LY6KQ17RY6 165 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 BRDTQ58F21 947 aaPredicted RBP10.21□□□□□ -0.77
CHD4-204ENST00000535810 VSIG10LQ86VR7 867 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 FCHSD1Q86WN1 690 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 FANCBQ8NB91 859 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 MAFAQ8NHW3 353 aaPredicted RBP10.21□□□□□ -0.77
CHD4-204ENST00000535810 AFG1LQ8WV93 481 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 FAM122AQ96E09 287 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 MTG1Q9BT17 334 aaPredicted RBP10.21□□□□□ -0.77
CHD4-204ENST00000535810 SEZ6LQ9BYH1 1024 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 ALDH8A1Q9H2A2 487 aaPredicted RBP10.21□□□□□ -0.77
CHD4-204ENST00000535810 DDX41Q9UJV9 622 aaKnown RBP10.21□□□□□ -0.77
CHD4-204ENST00000535810 BRPF3Q9ULD4 1205 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 MRVI1Q9Y6F6 885 aa10.21□□□□□ -0.77
CHD4-204ENST00000535810 FRMPD4Q14CM0 1322 aa10.21□□□□□ -0.78
CHD4-204ENST00000535810 B4GALT4O60513 344 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 REC8O95072 547 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 GH1P01241 217 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 MMP3P08254 477 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
CHD4-204ENST00000535810 MYCLP12524 364 aaPredicted RBP10.2□□□□□ -0.78
CHD4-204ENST00000535810 ZNF697Q5TEC3 545 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 MFSD5Q6N075 450 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 USP17L6PQ6QN14 398 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 EMID1Q96A84 441 aaPredicted RBP10.2□□□□□ -0.78
CHD4-204ENST00000535810 FAM161BQ96MY7 647 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 CDX2Q99626 313 aaPredicted RBP10.2□□□□□ -0.78
CHD4-204ENST00000535810 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 TRPV6Q9H1D0 765 aa10.2□□□□□ -0.78
CHD4-204ENST00000535810 TRMT13Q9NUP7 481 aaKnown RBP10.2□□□□□ -0.78
CHD4-204ENST00000535810 UMODL1Q5DID0 1318 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 CNTNAP5Q8WYK1 1306 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 hCG_1642624A0A1W2PR95 340 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 DPYSL4O14531 572 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 MEIS2O14770 477 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 ZBTB43O43298 467 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 KPNA6O60684 536 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 CPA1P15085 419 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 CSF2RAP15509 400 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 CCND2P30279 289 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 RCAN1P53805 252 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 FUT2Q10981 343 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 RTN1Q16799 776 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 SYNE3Q6ZMZ3 975 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 CCDC82Q8N4S0 544 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 RNPC3Q96LT9 517 aaKnown RBP10.19□□□□□ -0.78
CHD4-204ENST00000535810 JAKMIP1Q96N16 626 aaKnown RBP10.19□□□□□ -0.78
CHD4-204ENST00000535810 NOC4LQ9BVI4 516 aaKnown RBP10.19□□□□□ -0.78
CHD4-204ENST00000535810 HIPK3Q9H422 1215 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
CHD4-204ENST00000535810 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
CHD4-204ENST00000535810 KLF18A0A0U1RQI7 1052 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 GOLGA8AA7E2F4 631 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 GOLGA8BA8MQT2 603 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 UBA1P22314 1058 aaKnown RBP10.18□□□□□ -0.78
CHD4-204ENST00000535810 CYP2C18P33260 490 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 MRPS9P82933 396 aaKnown RBP10.18□□□□□ -0.78
CHD4-204ENST00000535810 SP2Q02086 613 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 PPIGQ13427 754 aaKnown RBP eCLIP10.18□□□□□ -0.781e-9■□□□□ 8.9
CHD4-204ENST00000535810 LAMC2Q13753 1193 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 NFRKBQ6P4R8 1299 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 KCNV1Q6PIU1 500 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 C16orf59Q7L2K0 433 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 HEATR3Q7Z4Q2 680 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 TMEM199Q8N511 208 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 PPTC7Q8NI37 304 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 PPP1R13LQ8WUF5 828 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 KAT2BQ92831 832 aa10.18□□□□□ -0.78
CHD4-204ENST00000535810 GPKOWQ92917 476 aaPredicted RBP eCLIP10.18□□□□□ -0.78
CHD4-204ENST00000535810 CUL5Q93034 780 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms