RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 PPP1R12CQ9BZL4 782 aa10.87□□□□□ -0.67
CDCA3-204ENST00000535406 DDX41Q9UJV9 622 aaKnown RBP10.87□□□□□ -0.67
CDCA3-204ENST00000535406 MEIS2O14770 477 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 STAM2O75886 525 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 RGS20O76081 388 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
CDCA3-204ENST00000535406 RPS6KB1P23443 525 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 METAP2P50579 478 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDCA3-204ENST00000535406 LAMC2Q13753 1193 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 SHHQ15465 462 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 GNPTABQ3T906 1256 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 FAM47CQ5HY64 1035 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 MFSD5Q6N075 450 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 GPKOWQ92917 476 aaPredicted RBP eCLIP10.86□□□□□ -0.67
CDCA3-204ENST00000535406 BRF1Q92994 677 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 ALDH8A1Q9H2A2 487 aaPredicted RBP10.86□□□□□ -0.67
CDCA3-204ENST00000535406 HIPK3Q9H422 1215 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
CDCA3-204ENST00000535406 CCDC196A0A1B0GTZ2 297 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 hCG_1984214I3L0E3 225 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 TGFB3P10600 412 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 UBA1P22314 1058 aaKnown RBP10.85□□□□□ -0.67
CDCA3-204ENST00000535406 NAPAP54920 295 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 APOBRQ0VD83 1088 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 PPIGQ13427 754 aaKnown RBP eCLIP10.85□□□□□ -0.671e-6■■■■□ 25.5
CDCA3-204ENST00000535406 DGKDQ16760 1214 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 WWC2Q6AWC2 1192 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 NFRKBQ6P4R8 1299 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 DHX37Q8IY37 1157 aaKnown RBP10.85□□□□□ -0.67
CDCA3-204ENST00000535406 TMEM199Q8N511 208 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 ZNF713Q8N859 430 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-204ENST00000535406 PPTC7Q8NI37 304 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
CDCA3-204ENST00000535406 INPP4AQ96PE3 977 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-204ENST00000535406 TRPV6Q9H1D0 765 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 NID2Q14112 1375 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 MYH7BA7E2Y1 1941 aa10.85□□□□□ -0.67
CDCA3-204ENST00000535406 SPDYE3A6NKU9 549 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 FIBPO43427 364 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 SORBS3O60504 671 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 GGPS1O95749 300 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 SUPT20HL2P0C7V6 817 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 CDC27P30260 824 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 CYP2C18P33260 490 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 EPHB4P54760 987 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 PTPN11Q06124 597 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 FUT2Q10981 343 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 UBE2SQ16763 222 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 CELF3Q5SZQ8 465 aaKnown RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 PCNX4Q63HM2 1172 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 GPR153Q6NV75 609 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 XRRA1Q6P2D8 792 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 FBXL16Q8N461 479 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 FBXO22Q8NEZ5 403 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 SPATA33Q96N06 139 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 NOC4LQ9BVI4 516 aaKnown RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 KATNAL1Q9BW62 490 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 AGXT2Q9BYV1 514 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 TRMT13Q9NUP7 481 aaKnown RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 TANC1Q9C0D5 1861 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 STXBP3O00186 592 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 ZNF286BP0CG31 522 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 CSF2RAP15509 400 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 ICAM3P32942 547 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 HSDL1Q3SXM5 330 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 PSRC1Q6PGN9 363 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 RUFY3Q7L099 469 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 PPP1R13LQ8WUF5 828 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 USP26Q9BXU7 913 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 EHMT1Q9H9B1 1298 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 MLXIPQ9HAP2 919 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 RTEL1Q9NZ71 1219 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 CYP46A1Q9Y6A2 500 aa10.84□□□□□ -0.67
CDCA3-204ENST00000535406 V9GY48 417 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-204ENST00000535406 UMODL1Q5DID0 1318 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 SPATA31C2B4DYI2 1134 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 NOP56O00567 594 aaKnown RBP10.83□□□□□ -0.68
CDCA3-204ENST00000535406 F2P00734 622 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 CYP2C9P11712 490 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 HOXD8P13378 290 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-204ENST00000535406 ADD1P35611 737 aaKnown RBP10.83□□□□□ -0.68
CDCA3-204ENST00000535406 ADCY7P51828 1080 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 CCL23P55773 120 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 SP2Q02086 613 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 NEDD9Q14511 834 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 MFSD10Q14728 455 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 TYW1BQ6NUM6 668 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 NLRX1Q86UT6 975 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 SESTD1Q86VW0 696 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 TEX2Q8IWB9 1127 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 KAT2BQ92831 832 aa10.83□□□□□ -0.68
CDCA3-204ENST00000535406 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.83□□□□□ -0.683e-7■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms