RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CPT1AP50416 773 aa25.98■■□□□ 1.75
SFSWAP-204ENST00000535399 MCTP2Q6DN12 878 aa25.98■■□□□ 1.75
SFSWAP-204ENST00000535399 CXCL17Q6UXB2 119 aa25.98■■□□□ 1.75
SFSWAP-204ENST00000535399 CCDC83Q8IWF9 413 aa25.98■■□□□ 1.75
SFSWAP-204ENST00000535399 AFG1LQ8WV93 481 aa25.98■■□□□ 1.75
SFSWAP-204ENST00000535399 PCDHA4Q9UN74 947 aa25.98■■□□□ 1.75
SFSWAP-204ENST00000535399 ELP1O95163 1332 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 CELF3Q5SZQ8 465 aaKnown RBP25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 C1orf53Q5VUE5 145 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 NLRX1Q86UT6 975 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 DAGLBQ8NCG7 672 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 CRYGNQ8WXF5 182 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 GPRASP2Q96D09 838 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 GLT1D1Q96MS3 346 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 STARD7Q9NQZ5 370 aa25.97■■□□□ 1.75
SFSWAP-204ENST00000535399 CD2BP2O95400 341 aaKnown RBP25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 GGPS1O95749 300 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 RTP1P59025 263 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 ARHGAP4P98171 946 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 LAMC2Q13753 1193 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 MYSM1Q5VVJ2 828 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 GALNT17Q6IS24 598 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 DHX37Q8IY37 1157 aaKnown RBP25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 WASF1Q92558 559 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 ALG1Q9BT22 464 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 PHF20Q9BVI0 1012 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 JADE2Q9NQC1 790 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 GJB4Q9NTQ9 266 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 KCNJ14Q9UNX9 436 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 KIAA1217Q5T5P2 1943 aa25.96■■□□□ 1.75
SFSWAP-204ENST00000535399 M0R2N6 131 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 CABYRO75952 493 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 TRIM60Q495X7 471 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 BRDTQ58F21 947 aaPredicted RBP25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 C7orf61Q8IZ16 206 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 BLIDQ8IZY5 108 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 MXRA8Q9BRK3 442 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 BCAS3Q9H6U6 928 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 POLR3EQ9NVU0 708 aa25.95■■□□□ 1.74
SFSWAP-204ENST00000535399 SORBS3O60504 671 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 MMP3P08254 477 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 MYL3P08590 195 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 CYP3A4P08684 503 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 PURAQ00577 322 aaKnown RBP25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 PPTC7Q8NI37 304 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 CYP2W1Q8TAV3 490 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 SENP7Q9BQF6 1050 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 LLPHQ9BRT6 129 aaKnown RBP25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 NR2E3Q9Y5X4 410 aa25.94■■□□□ 1.74
SFSWAP-204ENST00000535399 DNAH12Q6ZR08 3092 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 KPNA6O60684 536 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 XBP1P17861 261 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 MTMR1Q13613 665 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 NEDD9Q14511 834 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 CEP55Q53EZ4 464 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 VTI1AQ96AJ9 217 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 CDHR1Q96JP9 859 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 ATP11BQ9Y2G3 1177 aa25.93■■□□□ 1.74
SFSWAP-204ENST00000535399 ALPK3Q96L96 1907 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 GRIN2DO15399 1336 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 A0A0U1RQG5 324 aaPredicted RBP25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 H0YGN5 161 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 EDIL3O43854 480 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 ATP9AO75110 1047 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 HOXD8P13378 290 aaPredicted RBP25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 KCNA2P16389 499 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 CDK7P50613 346 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 HSDL1Q3SXM5 330 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 METTL7BQ6UX53 244 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 SLC43A3Q8NBI5 491 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 SPATA33Q96N06 139 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 MTG1Q9BT17 334 aaPredicted RBP25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 MLXIPQ9HAP2 919 aa25.92■■□□□ 1.74
SFSWAP-204ENST00000535399 ARVCFO00192 962 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 MEIS1O00470 390 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 MAFGO15525 162 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 PSMC6P62333 389 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 TLE2Q04725 743 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 NIPA1Q7RTP0 329 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 TMX3Q96JJ7 454 aa25.91■■□□□ 1.74
SFSWAP-204ENST00000535399 FAM86B1E9PN63 330 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 FAM86B2P0C5J1 330 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 MCM2P49736 904 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 ITGA7Q13683 1181 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 DGKDQ16760 1214 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 PRPF38BQ5VTL8 546 aaKnown RBP25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 CYFIP1Q7L576 1253 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 ANKRD33Q7Z3H0 272 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 KCNH7Q9NS40 1196 aa25.9■■□□□ 1.74
SFSWAP-204ENST00000535399 CEP290O15078 2479 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 IGLV3-22A0A075B6J6 115 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 ARP10275 920 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 CIITAP33076 1130 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 ZNF76P36508 570 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 OXER1Q8TDS5 423 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 ZMYND8Q9ULU4 1186 aaPredicted RBP25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 TELO2Q9Y4R8 837 aa25.89■■□□□ 1.74
SFSWAP-204ENST00000535399 PQBP1O60828 265 aaKnown RBP25.88■■□□□ 1.73
SFSWAP-204ENST00000535399 GIMAP8Q8ND71 665 aaPredicted RBP25.88■■□□□ 1.73
SFSWAP-204ENST00000535399 TBCKQ8TEA7 893 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms