RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CCNT1O60563 726 aaKnown RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 TDP2O95551 362 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 YEATS4O95619 227 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 IGHA2P01877 340 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 HOXD10P28358 340 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 CAP1Q01518 475 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 PTPAQ15257 358 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF174Q15697 407 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 STXBP2Q15833 593 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 FOXD4L6Q3SYB3 417 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 DNTTIP2Q5QJE6 756 aaKnown RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 FOXD4L3Q6VB84 417 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 NPLOC4Q8TAT6 608 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 CD99L2Q8TCZ2 262 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 USP25Q9UHP3 1055 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 RCOR1Q9UKL0 485 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 CEP131Q9UPN4 1083 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 CLIC4Q9Y696 253 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 FAM86B1E9PN63 330 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 FAM86B2P0C5J1 330 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 ZNF76P36508 570 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 SLC39A14Q15043 492 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 OLFML2BQ68BL8 750 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 LENG9Q96B70 501 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 INPP4AQ96PE3 977 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 APBA2Q99767 749 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 SCAND2PQ9GZW5 306 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 JADE2Q9NQC1 790 aa13.9□□□□□ -0.18
SCARB1-204ENST00000535005 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
SCARB1-204ENST00000535005 MYH15Q9Y2K3 1946 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 SYNGAP1Q96PV0 1343 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 GOLGA6L6A8MZA4 724 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 LAD1O00515 517 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 MAFGO15525 162 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
SCARB1-204ENST00000535005 ITGB5P18084 799 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 MCM7P33993 719 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 PRMT2P55345 433 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 UBE2HP62256 183 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 PDE4DQ08499 809 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 IRF5Q13568 498 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 SYCP1Q15431 976 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 RNF214Q8ND24 703 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 TINF2Q9BSI4 451 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 FTOQ9C0B1 505 aaKnown RBP eCLIP13.89□□□□□ -0.19
SCARB1-204ENST00000535005 SRRDQ9UH36 339 aa13.89□□□□□ -0.19
SCARB1-204ENST00000535005 TBX3O15119 743 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 NEMFO60524 1076 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 ECM2O94769 699 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-204ENST00000535005 CYP2B6P20813 491 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 ICAM3P32942 547 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 FLT3LGP49771 235 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 ATP2C1P98194 919 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-204ENST00000535005 SETQ01105 290 aaPredicted RBP13.88□□□□□ -0.19
SCARB1-204ENST00000535005 PTGDRQ13258 359 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 NLRX1Q86UT6 975 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 CYP2W1Q8TAV3 490 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 GPRASP2Q96D09 838 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 MTMR9Q96QG7 549 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 GABRQQ9UN88 632 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 CNPY2Q9Y2B0 182 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 PCNTO95613 3336 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 PLXNA1Q9UIW2 1896 aa13.88□□□□□ -0.19
SCARB1-204ENST00000535005 SLC37A4O43826 429 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 RGS20O76081 388 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 PRPHP41219 470 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 PRKCZQ05513 592 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 PRR16Q569H4 304 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 PLA2G4DQ86XP0 818 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 TRMT44Q8IYL2 757 aaKnown RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 CDHR1Q96JP9 859 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 FAM20AQ96MK3 541 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 TMEM60Q9H2L4 133 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 SPATA31C2B4DYI2 1134 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 PPP6R2O75170 966 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 SNAI1O95863 264 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 ZSCAN20P17040 1043 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 CEBPZQ03701 1054 aaKnown RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 STK38Q15208 465 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 VTA1Q9NP79 307 aa13.87□□□□□ -0.19
SCARB1-204ENST00000535005 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-204ENST00000535005 ZSWIM8A7E2V4 1837 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms