RNA–Protein interactions for RNA: ENST00000534999.6

CACNB4-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB4, Length 2,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-209ENST00000534999 BIN2Q9UBW5 565 aaPredicted RBP11.97□□□□□ -0.49
CACNB4-209ENST00000534999 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
CACNB4-209ENST00000534999 GRID2IPA4D2P6 1211 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 TLR2O60603 784 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 CLSTN1O94985 981 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 SERPING1P05155 500 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 NAB2Q15742 525 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 CALCRLQ16602 461 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
CACNB4-209ENST00000534999 SPATS2Q86XZ4 545 aaKnown RBP11.97□□□□□ -0.49
CACNB4-209ENST00000534999 CD302Q8IX05 232 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 OTUD6BQ8N6M0 293 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 RAD54LQ92698 747 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 CEP89Q96ST8 783 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
CACNB4-209ENST00000534999 TMEM260Q9NX78 707 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
CACNB4-209ENST00000534999 NOL4O94818 638 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 KLRC1P26715 233 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 ORC2Q13416 577 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 CCDC40Q4G0X9 1142 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 FAM83BQ5T0W9 1011 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 NAA35Q5VZE5 725 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 DDX12PQ92771 950 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 SYN2Q92777 582 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 MTMR9Q96QG7 549 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 LSM14BQ9BX40 385 aaKnown RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 RIC8AQ9NPQ8 531 aa11.96□□□□□ -0.49
CACNB4-209ENST00000534999 SEC63Q9UGP8 760 aaKnown RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 PACSIN2Q9UNF0 486 aaPredicted RBP11.96□□□□□ -0.49
CACNB4-209ENST00000534999 MYH1P12882 1939 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 MEFVO15553 781 aaPredicted RBP11.96□□□□□ -0.5
CACNB4-209ENST00000534999 RASA1P20936 1047 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 TAF1P21675 1872 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 USP8P40818 1118 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.5
CACNB4-209ENST00000534999 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.5
CACNB4-209ENST00000534999 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.5
CACNB4-209ENST00000534999 EHHADHQ08426 723 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 TMEM266Q2M3C6 531 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 MEI1Q5TIA1 1274 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 EMC10Q5UCC4 262 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 SPTY2D1Q68D10 685 aaPredicted RBP11.96□□□□□ -0.5
CACNB4-209ENST00000534999 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.5
CACNB4-209ENST00000534999 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 WHAMMQ8TF30 809 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 ATP6V1G3Q96LB4 118 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 VAT1LQ9HCJ6 419 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 ATP6V0A2Q9Y487 856 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.5
CACNB4-209ENST00000534999 POTEMA6NI47 508 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 RAD51CO43502 376 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 SLC37A4O43826 429 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 PPP1R37O75864 691 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 MNAT1P51948 309 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 POLR2FP61218 127 aaKnown RBP11.95□□□□□ -0.5
CACNB4-209ENST00000534999 PSMD2Q13200 908 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 TRADDQ15628 312 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 CDC37Q16543 378 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-209ENST00000534999 PTGISQ16647 500 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 CLEC4GQ6UXB4 293 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 MICALCLQ6ZW33 695 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 TXNRD3Q86VQ6 643 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 MYOCDQ8IZQ8 938 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 PROM2Q8N271 834 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 SNX29Q8TEQ0 813 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 ZNF473Q8WTR7 871 aaKnown RBP11.95□□□□□ -0.5
CACNB4-209ENST00000534999 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 TBC1D5Q92609 795 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
CACNB4-209ENST00000534999 PIGSQ96S52 555 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.95□□□□□ -0.5
CACNB4-209ENST00000534999 PCDHGC5Q9Y5F6 944 aa11.95□□□□□ -0.5
CACNB4-209ENST00000534999 HMGB1P1B2RPK0 211 aaPredicted RBP11.94□□□□□ -0.5
CACNB4-209ENST00000534999 H0YHG0 523 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 FNTAP49354 379 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
CACNB4-209ENST00000534999 KCNK18Q7Z418 384 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 MAATS1Q7Z4T9 603 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 NUDT12Q9BQG2 462 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 PAGR1Q9BTK6 254 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 ANKRD2Q9GZV1 360 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 GEMIN8Q9NWZ8 242 aaKnown RBP11.94□□□□□ -0.5
CACNB4-209ENST00000534999 SAP30BPQ9UHR5 308 aaKnown RBP11.94□□□□□ -0.5
CACNB4-209ENST00000534999 PLAAQ9Y263 795 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 MAST2Q6P0Q8 1798 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 MYO1FO00160 1098 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 TRAF5O00463 557 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 FSBPO95073 299 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 TDP2O95551 362 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 LDHBP07195 334 aaKnown RBP11.94□□□□□ -0.5
CACNB4-209ENST00000534999 MDH1P40925 334 aaKnown RBP11.94□□□□□ -0.5
CACNB4-209ENST00000534999 HSPA2P54652 639 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 TNNC1P63316 161 aa11.94□□□□□ -0.5
CACNB4-209ENST00000534999 ARID5AQ03989 594 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms