RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 USP17L6PQ6QN14 398 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 SESTD1Q86VW0 696 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
SF3B2-215ENST00000534307 INPP4AQ96PE3 977 aaPredicted RBP16.22■□□□□ 0.19
SF3B2-215ENST00000534307 CTAGE1Q96RT6 745 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 IL23AQ9NPF7 189 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 TANC1Q9C0D5 1861 aa16.21■□□□□ 0.19
SF3B2-215ENST00000534307 hCG_1642624A0A1W2PR95 340 aa16.21■□□□□ 0.19
SF3B2-215ENST00000534307 CYP2C9P11712 490 aa16.21■□□□□ 0.19
SF3B2-215ENST00000534307 UBA1P22314 1058 aaKnown RBP16.21■□□□□ 0.19
SF3B2-215ENST00000534307 DNAJB2P25686 324 aa16.21■□□□□ 0.19
SF3B2-215ENST00000534307 DGKDQ16760 1214 aa16.21■□□□□ 0.19
SF3B2-215ENST00000534307 CELF3Q5SZQ8 465 aaKnown RBP16.21■□□□□ 0.19
SF3B2-215ENST00000534307 PSRC1Q6PGN9 363 aaPredicted RBP16.21■□□□□ 0.19
SF3B2-215ENST00000534307 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.19
SF3B2-215ENST00000534307 CNTNAP5Q8WYK1 1306 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 STAM2O75886 525 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 F2P00734 622 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 HMGB1P09429 215 aaKnown RBP16.2■□□□□ 0.18
SF3B2-215ENST00000534307 ACRP10323 421 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
SF3B2-215ENST00000534307 ICAM3P32942 547 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 RCAN1P53805 252 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 CCL23P55773 120 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 HSDL1Q3SXM5 330 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 ZNF365Q70YC5 407 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 DHX37Q8IY37 1157 aaKnown RBP16.2■□□□□ 0.18
SF3B2-215ENST00000534307 CCDC82Q8N4S0 544 aa16.2■□□□□ 0.18
SF3B2-215ENST00000534307 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
SF3B2-215ENST00000534307 PIEZO1Q92508 2521 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 SPATA31C2B4DYI2 1134 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 HAS3O00219 553 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 ZBTB43O43298 467 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 GGPS1O95749 300 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 FAM47CQ5HY64 1035 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 PCNX4Q63HM2 1172 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 XRRA1Q6P2D8 792 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 HERVK_113Q902F9 699 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 PSTPIP2Q9H939 334 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 RBM28Q9NW13 759 aaKnown RBP16.19■□□□□ 0.18
SF3B2-215ENST00000534307 SNX14Q9Y5W7 946 aa16.19■□□□□ 0.18
SF3B2-215ENST00000534307 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 CPA1P15085 419 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 RTN1Q16799 776 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 GDF6Q6KF10 455 aaPredicted RBP16.18■□□□□ 0.18
SF3B2-215ENST00000534307 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 CUL5Q93034 780 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 SCLYQ96I15 445 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 SPATA33Q96N06 139 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 ZNF576Q9H609 170 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 BCAS3Q9H6U6 928 aa16.18■□□□□ 0.18
SF3B2-215ENST00000534307 NID2Q14112 1375 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 DOCK5Q9H7D0 1870 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 KLF18A0A0U1RQI7 1052 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.17■□□□□ 0.18
SF3B2-215ENST00000534307 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.17■□□□□ 0.18
SF3B2-215ENST00000534307 REC8O95072 547 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 NEFLP07196 543 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 PSEN2P49810 448 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 ADAMTS19Q8TE59 1207 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 FAM122AQ96E09 287 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 JAKMIP1Q96N16 626 aaKnown RBP16.17■□□□□ 0.18
SF3B2-215ENST00000534307 C16orf70Q9BSU1 422 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 CXXC1Q9P0U4 656 aaPredicted RBP16.17■□□□□ 0.18
SF3B2-215ENST00000534307 THEGQ9P2T0 379 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 GTF2IRD1Q9UHL9 959 aa16.17■□□□□ 0.18
SF3B2-215ENST00000534307 GOLGA8AA7E2F4 631 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 GOLGA8BA8MQT2 603 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 FIBPO43427 364 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 EPB41L2O43491 1005 aaKnown RBP16.16■□□□□ 0.18
SF3B2-215ENST00000534307 SORBS3O60504 671 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 CDC27P30260 824 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 RBL2Q08999 1139 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 MFSD10Q14728 455 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 PTGISQ16647 500 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 UBE2SQ16763 222 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 METTL7BQ6UX53 244 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 HEATR3Q7Z4Q2 680 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 TEX2Q8IWB9 1127 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 ATXN2LQ8WWM7 1075 aaKnown RBP16.16■□□□□ 0.18
SF3B2-215ENST00000534307 DHX38Q92620 1227 aaKnown RBP16.16■□□□□ 0.18
SF3B2-215ENST00000534307 HDAC6Q9UBN7 1215 aa16.16■□□□□ 0.18
SF3B2-215ENST00000534307 GRXCR1A8MXD5 290 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 FGBP02675 491 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 IQCF3P0C7M6 154 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 RPS6KB1P23443 525 aa16.15■□□□□ 0.18
SF3B2-215ENST00000534307 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms