RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 MAF1Q9H063 256 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 CPVLQ9H3G5 476 aa10.11□□□□□ -0.79
COPB1-210ENST00000533533 COL4A4P53420 1690 aaPredicted RBP10.11□□□□□ -0.79
COPB1-210ENST00000533533 SIP14410 1827 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 PRC1O43663 620 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 DHX16O60231 1041 aaKnown RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 GH1P01241 217 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 SELPP16109 830 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 CASTP20810 708 aaKnown RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 PLA2G5P39877 138 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 WDR5P61964 334 aaKnown RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 RBL2Q08999 1139 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 CDC37Q16543 378 aaPredicted RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 LY6KQ17RY6 165 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 NFXL1Q6ZNB6 911 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 LRRC8DQ7L1W4 858 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 SPRED2Q7Z698 418 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 SYTL5Q8TDW5 730 aaPredicted RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 NSUN6Q8TEA1 469 aaKnown RBP10.1□□□□□ -0.79
COPB1-210ENST00000533533 TBC1D5Q92609 795 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 FAM122AQ96E09 287 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 TAAR1Q96RJ0 339 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 IWS1Q96ST2 819 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 COL20A1Q9P218 1284 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 KAT6AQ92794 2004 aa10.1□□□□□ -0.79
COPB1-210ENST00000533533 ABCB11O95342 1321 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 LCHNA4D1U4 455 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 CXCL10P02778 98 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 CKBP12277 381 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 MCM5P33992 734 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 FGD1P98174 961 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 STXBP2Q15833 593 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 DGKDQ16760 1214 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 CNKSR3Q6P9H4 555 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 TMCO2Q7Z6W1 182 aaPredicted RBP10.09□□□□□ -0.79
COPB1-210ENST00000533533 MCF2L2Q86YR7 1114 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 MB21D2Q8IYB1 491 aaPredicted RBP10.09□□□□□ -0.79
COPB1-210ENST00000533533 ADGRF4Q8IZF3 695 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 DHX38Q92620 1227 aaKnown RBP10.09□□□□□ -0.79
COPB1-210ENST00000533533 NEK1Q96PY6 1258 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 RMDN3Q96TC7 470 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 LRRC2Q9BYS8 371 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 EPHX3Q9H6B9 360 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 LMCD1Q9NZU5 365 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 HDAC6Q9UBN7 1215 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 GTF2IRD1Q9UHL9 959 aa10.09□□□□□ -0.79
COPB1-210ENST00000533533 DDX41Q9UJV9 622 aaKnown RBP10.09□□□□□ -0.79
COPB1-210ENST00000533533 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 CCDC69A6NI79 296 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 NBNO60934 754 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 EIF3JO75822 258 aaKnown RBP10.08□□□□□ -0.8
COPB1-210ENST00000533533 GJB5O95377 273 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 PARP1P09874 1014 aaKnown RBP10.08□□□□□ -0.8
COPB1-210ENST00000533533 ANTXR2P58335 489 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 DEFB103AP81534 67 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 KRT32Q14532 448 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 SEC23AQ15436 765 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 ARHGEF16Q5VV41 709 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 CATIPQ7Z7H3 387 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 C7orf31Q8N865 590 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 GDPD5Q8WTR4 605 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 ANKS1AQ92625 1134 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 EMID1Q96A84 441 aaPredicted RBP10.08□□□□□ -0.8
COPB1-210ENST00000533533 JAKMIP1Q96N16 626 aaKnown RBP10.08□□□□□ -0.8
COPB1-210ENST00000533533 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 NAP1L2Q9ULW6 460 aaPredicted RBP10.08□□□□□ -0.8
COPB1-210ENST00000533533 MRPL11Q9Y3B7 192 aaKnown RBP10.08□□□□□ -0.8
COPB1-210ENST00000533533 GTF3C3Q9Y5Q9 886 aa10.08□□□□□ -0.8
COPB1-210ENST00000533533 TRIOO75962 3097 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 EFCAB14O75071 495 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 F2P00734 622 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 NR3C2P08235 984 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 EIF2AK2P19525 551 aaKnown RBP10.07□□□□□ -0.8
COPB1-210ENST00000533533 HSPA4P34932 840 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 PSEN2P49810 448 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 ERVK-21P61565 698 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 PTK7Q13308 1070 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 LAMC2Q13753 1193 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 MFSD10Q14728 455 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 TCTN1Q2MV58 587 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 ASPRV1Q53RT3 343 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 FBXO11Q86XK2 927 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 RAB11FIP4Q86YS3 637 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 PPTC7Q8NI37 304 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 TCEANC2Q96MN5 208 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 TGS1Q96RS0 853 aaKnown RBP10.07□□□□□ -0.8
COPB1-210ENST00000533533 RAD9AQ99638 391 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 ALG1Q9BT22 464 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 LRFN3Q9BTN0 628 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 KATNAL1Q9BW62 490 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms