RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 MRVI1Q9Y6F6 885 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 KAT6AQ92794 2004 aa18.31■□□□□ 0.52
CHMP4A-207ENST00000533523 CFBP00751 764 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 PARP1P09874 1014 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 PSEN2P49810 448 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 CNKSR3Q6P9H4 555 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 HDAC6Q9UBN7 1215 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 GTF2IRD1Q9UHL9 959 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 MTUS1Q9ULD2 1270 aa18.3■□□□□ 0.52
CHMP4A-207ENST00000533523 MYO7AQ13402 2215 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 SORBS3O60504 671 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 CKBP12277 381 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 NT5C2P49902 561 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 MFSD10Q14728 455 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 RUFY2Q8WXA3 655 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 ANKS1AQ92625 1134 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 UBAC1Q9BSL1 405 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 MAF1Q9H063 256 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 PXMP2Q9NR77 195 aa18.29■□□□□ 0.52
CHMP4A-207ENST00000533523 PI4K2BG5E9Z4 385 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 NBNO60934 754 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 F2P00734 622 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 NR3C2P08235 984 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 RBL2Q08999 1139 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 KIAA0753Q2KHM9 967 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 TCTN1Q2MV58 587 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 DHX37Q8IY37 1157 aaKnown RBP18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 PPTC7Q8NI37 304 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 HLA-CQ95604 372 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 EMID1Q96A84 441 aaPredicted RBP18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 DSCC1Q9BVC3 393 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 JMJD4Q9H9V9 463 aa18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 DDX41Q9UJV9 622 aaKnown RBP18.28■□□□□ 0.52
CHMP4A-207ENST00000533523 EIF3JO75822 258 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 PARNO95453 639 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 CXCL10P02778 98 aa18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 GPNMBQ14956 572 aa18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 IMMTQ16891 758 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 FAM117BQ6P1L5 589 aa18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.52
CHMP4A-207ENST00000533523 MYCLP12524 364 aaPredicted RBP18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 PTK7Q13308 1070 aa18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 LAMC2Q13753 1193 aa18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 WNT8BQ93098 351 aa18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 KRT23Q9C075 422 aa18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 ZSWIM5Q9P217 1185 aa18.26■□□□□ 0.51
CHMP4A-207ENST00000533523 ABHD14A-ACY1A0A1B0GW23 586 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 OPLAHO14841 1288 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 EFCAB14O75071 495 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 GJB5O95377 273 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 HSD17B4P51659 736 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 ZNF200P98182 395 aaPredicted RBP18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 BMP2KLQ5H9B9 411 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 ZNF618Q5T7W0 954 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 STAG2Q8N3U4 1231 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 SPATA33Q96N06 139 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 TGS1Q96RS0 853 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 CNNM2Q9H8M5 875 aa18.25■□□□□ 0.51
CHMP4A-207ENST00000533523 VPS13AQ96RL7 3174 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 HAS3O00219 553 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 GGPS1O95749 300 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 IKBKEQ14164 716 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 TRIM71Q2Q1W2 868 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 IL31RAQ8NI17 732 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 RAD9AQ99638 391 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 DCHS1Q96JQ0 3298 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
CHMP4A-207ENST00000533523 LINC01553A4QN01 128 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 KLRF2D3W0D1 207 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 PPP1R11O60927 126 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 UBA1P22314 1058 aaKnown RBP18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 CHMLP26374 656 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 MBTPS1Q14703 1052 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 TRAF7Q6Q0C0 670 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 HOMER1Q86YM7 354 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
CHMP4A-207ENST00000533523 ZBTB5O15062 677 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 LGR5O75473 907 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 RGS20O76081 388 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 HOXD8P13378 290 aaPredicted RBP18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 CCND2P30279 289 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 THPOP40225 353 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 ERVK-21P61565 698 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 PGM5Q15124 567 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 HSDL1Q3SXM5 330 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 CELF3Q5SZQ8 465 aaKnown RBP18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 MYOCDQ8IZQ8 938 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 LMCD1Q9NZU5 365 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 EMSYQ7Z589 1322 aa18.22■□□□□ 0.51
CHMP4A-207ENST00000533523 MRE11P49959 708 aa18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 GHRHRQ02643 423 aa18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 MYSM1Q5VVJ2 828 aa18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 KCNV1Q6PIU1 500 aa18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 FBXO22Q8NEZ5 403 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms