RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 ARL8AQ96BM9 186 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 PIGSQ96S52 555 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 PSMB7Q99436 277 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 EYA3Q99504 573 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 RAB34Q9BZG1 259 aa18.37■□□□□ 0.53
CTSB-228ENST00000533455 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 SERPING1P05155 500 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 LDHCP07864 332 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 CDK8P49336 464 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 SEPT2Q15019 361 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 SLC9C1Q4G0N8 1177 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 BCAS4Q8TDM0 211 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 ZIM3Q96PE6 472 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 RIOX1Q9H6W3 641 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 TMEM260Q9NX78 707 aa18.36■□□□□ 0.53
CTSB-228ENST00000533455 ATXN2Q99700 1313 aaKnown RBP18.36■□□□□ 0.53
CTSB-228ENST00000533455 MRPS25P82663 173 aaKnown RBP18.35■□□□□ 0.53
CTSB-228ENST00000533455 DIXDC1Q155Q3 683 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 MAPKAPK5Q8IW41 473 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 ANKRD13CQ8N6S4 541 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 LUC7LQ9NQ29 371 aaKnown RBP18.35■□□□□ 0.53
CTSB-228ENST00000533455 COL4A3BPQ9Y5P4 624 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 MYH7BA7E2Y1 1941 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 SLC37A4O43826 429 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 EDIL3O43854 480 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 NOL4O94818 638 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 TM4SF1P30408 202 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 ATP2B2Q01814 1243 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 PAK2Q13177 524 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 NAB2Q15742 525 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 TDRD12Q587J7 1177 aaKnown RBP18.35■□□□□ 0.53
CTSB-228ENST00000533455 EMC10Q5UCC4 262 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 SFMBT2Q5VUG0 894 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 ICE2Q659A1 982 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 CD302Q8IX05 232 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 MYOCDQ8IZQ8 938 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 IQCKQ8N0W5 287 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 DDX12PQ92771 950 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 RTFDC1Q9BY42 306 aaPredicted RBP18.35■□□□□ 0.53
CTSB-228ENST00000533455 EHD4Q9H223 541 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 SAP30BPQ9UHR5 308 aaKnown RBP18.35■□□□□ 0.53
CTSB-228ENST00000533455 FAM169AQ9Y6X4 670 aa18.35■□□□□ 0.53
CTSB-228ENST00000533455 FOCADQ5VW36 1801 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
CTSB-228ENST00000533455 BUB1O43683 1085 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 TLR2O60603 784 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 KRT79Q5XKE5 535 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 SNX29Q8TEQ0 813 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 IPO4Q8TEX9 1081 aaKnown RBP18.34■□□□□ 0.53
CTSB-228ENST00000533455 CEP63Q96MT8 703 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 PCDHGC5Q9Y5F6 944 aa18.34■□□□□ 0.53
CTSB-228ENST00000533455 GLI1P08151 1106 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 MARSP56192 900 aaKnown RBP18.33■□□□□ 0.53
CTSB-228ENST00000533455 FKBP3Q00688 224 aaKnown RBP18.33■□□□□ 0.53
CTSB-228ENST00000533455 COASYQ13057 564 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 GRIK5Q16478 980 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 KCNK18Q7Z418 384 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.53
CTSB-228ENST00000533455 C1orf131Q8NDD1 294 aaKnown RBP18.33■□□□□ 0.53
CTSB-228ENST00000533455 DNAJC19Q96DA6 116 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 MS4A14Q96JA4 679 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 NARFQ9UHQ1 456 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 ATP6V0A2Q9Y487 856 aa18.33■□□□□ 0.53
CTSB-228ENST00000533455 POTEMA6NI47 508 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 ZEB2O60315 1214 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 TDP2O95551 362 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 ADCY7P51828 1080 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 FAM83BQ5T0W9 1011 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 KDM7AQ6ZMT4 941 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 INPP4AQ96PE3 977 aaPredicted RBP18.33■□□□□ 0.52
CTSB-228ENST00000533455 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 NUDT12Q9BQG2 462 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 LEMD3Q9Y2U8 911 aa18.33■□□□□ 0.52
CTSB-228ENST00000533455 PALMO75781 387 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 HEXIM1O94992 359 aaKnown RBP18.32■□□□□ 0.52
CTSB-228ENST00000533455 CARSP49589 748 aaKnown RBP18.32■□□□□ 0.52
CTSB-228ENST00000533455 LRRC41Q15345 812 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 CFAP58Q5T655 872 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 MEI1Q5TIA1 1274 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 GLIS3Q8NEA6 775 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 VAT1LQ9HCJ6 419 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 NLRC4Q9NPP4 1024 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 PLIN4Q96Q06 1357 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 ARFGEF1Q9Y6D6 1849 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 GNA14O95837 355 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 NAP1L1P55209 391 aaKnown RBP18.32■□□□□ 0.52
CTSB-228ENST00000533455 SLC18A3Q16572 532 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 CCDC40Q4G0X9 1142 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 GPIHBP1Q8IV16 184 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 SUGP1Q8IWZ8 645 aaKnown RBP18.32■□□□□ 0.52
CTSB-228ENST00000533455 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
CTSB-228ENST00000533455 LSM14BQ9BX40 385 aaKnown RBP18.32■□□□□ 0.52
CTSB-228ENST00000533455 NFU1Q9UMS0 254 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 MYH4Q9Y623 1939 aa18.32■□□□□ 0.52
CTSB-228ENST00000533455 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
CTSB-228ENST00000533455 CES2O00748 559 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms