RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 TCF15Q12870 199 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 HIC1Q14526 733 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 MFSD10Q14728 455 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 PKN1Q16512 942 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 KIAA0753Q2KHM9 967 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 IER5LQ5T953 404 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
NXF1-215ENST00000533440 EP400NLQ6ZTU2 488 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 CHST3Q7LGC8 479 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 RNF135Q8IUD6 432 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 YME1L1Q96TA2 773 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 PRRX2Q99811 253 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 TMEM47Q9BQJ4 181 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 ALG1Q9BT22 464 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
NXF1-215ENST00000533440 ANAPC4Q9UJX5 808 aa9.18□□□□□ -0.94
NXF1-215ENST00000533440 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
NXF1-215ENST00000533440 RSPH10B2B2RC85 870 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 C5orf67F2Z3F1 127 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 ORC4O43929 436 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 RANBP6O60518 1105 aaKnown RBP9.17□□□□□ -0.94
NXF1-215ENST00000533440 RSPH10BP0C881 870 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 SNHG28P0DPA3 235 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 TOP1P11387 765 aaKnown RBP9.17□□□□□ -0.94
NXF1-215ENST00000533440 DLX2Q07687 328 aaPredicted RBP9.17□□□□□ -0.94
NXF1-215ENST00000533440 HYAL1Q12794 435 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 SMAD4Q13485 552 aaKnown RBP9.17□□□□□ -0.94
NXF1-215ENST00000533440 STXBP2Q15833 593 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 ZMYM1Q5SVZ6 1142 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 SERINC5Q86VE9 423 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 PPTC7Q8NI37 304 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 TAAR1Q96RJ0 339 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 IWS1Q96ST2 819 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 ALG13Q9NP73 1137 aaKnown RBP9.17□□□□□ -0.94
NXF1-215ENST00000533440 TCP11L1Q9NUJ3 509 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 CACNA1HO95180 2353 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 ZDBF2Q9HCK1 2354 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 ATG2AQ2TAZ0 1938 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 KIAA1217Q5T5P2 1943 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 NLRC5Q86WI3 1866 aa9.17□□□□□ -0.94
NXF1-215ENST00000533440 TMEM221A6NGB7 291 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 M0R296 226 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 RB1P06400 928 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 LINC00271P0C7V0 271 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 ZNF286BP0CG31 522 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 HOXC8P31273 242 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 FOXK2Q01167 660 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 ZNF543Q08ER8 600 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 LAMC2Q13753 1193 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 TRIM67Q6ZTA4 783 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
NXF1-215ENST00000533440 NSUN6Q8TEA1 469 aaKnown RBP9.16□□□□□ -0.94
NXF1-215ENST00000533440 TBC1D5Q92609 795 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 GPATCH3Q96I76 525 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 COL20A1Q9P218 1284 aa9.16□□□□□ -0.94
NXF1-215ENST00000533440 ZFHX2Q9C0A1 2572 aaPredicted RBP9.16□□□□□ -0.94
NXF1-215ENST00000533440 STXBP3O00186 592 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 GRM6O15303 877 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 TBX10O75333 385 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 PPFIA4O75335 1185 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 EIF3JO75822 258 aaKnown RBP9.15□□□□□ -0.94
NXF1-215ENST00000533440 UPP2O95045 317 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 EYA4O95677 639 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 THPOP40225 353 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 CLUL1Q15846 466 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.94
NXF1-215ENST00000533440 SEPT8Q92599 483 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 MSLNLQ96KJ4 702 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 RMDN3Q96TC7 470 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 OSBPL7Q9BZF2 842 aa9.15□□□□□ -0.94
NXF1-215ENST00000533440 CHMP4BQ9H444 224 aaKnown RBP9.15□□□□□ -0.94
NXF1-215ENST00000533440 DCHS1Q96JQ0 3298 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 ABCB11O95342 1321 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 SPTBN4Q9H254 2564 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 LOC730098B7Z3J9 87 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 GFRA3O60609 400 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 CAND2O75155 1236 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 CTNNB1P35222 781 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 GTF2F1P35269 517 aaKnown RBP eCLIP9.14□□□□□ -0.95
NXF1-215ENST00000533440 BMPR1AP36894 532 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 ZXDAP98168 799 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 ADAM15Q13444 863 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 CBX2Q14781 532 aaPredicted RBP9.14□□□□□ -0.95
NXF1-215ENST00000533440 ALX1Q15699 326 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 HSDL1Q3SXM5 330 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 USH1GQ495M9 461 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 GPATCH4Q5T3I0 446 aaKnown RBP9.14□□□□□ -0.95
NXF1-215ENST00000533440 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 MYSM1Q5VVJ2 828 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
NXF1-215ENST00000533440 FBXL6Q8N531 539 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
NXF1-215ENST00000533440 PI4K2BQ8TCG2 481 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms