RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 AMFRQ9UKV5 643 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 C1orf167Q5SNV9 1468 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 SALL3Q9BXA9 1300 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 MFAP3LO75121 409 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 C2orf54Q08AI8 447 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 CTTNQ14247 550 aaKnown RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 NFIXQ14938 502 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 LRRC23Q53EV4 343 aaPredicted RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 CABS1Q96KC9 395 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 COL15A1P39059 1388 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 TCP1P17987 556 aaKnown RBP13.37□□□□□ -0.27
BDNF-218ENST00000533246 ALX1Q15699 326 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 UBL4BQ8N7F7 174 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 E9PMD0 336 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 TDP2O95551 362 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 PLA2G4BP0C869 781 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 BMP3P12645 472 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 ITPK1Q13572 414 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 SEPT2Q15019 361 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 MAN2A1Q16706 1144 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 PACS2Q86VP3 889 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.37□□□□□ -0.27
BDNF-218ENST00000533246 EXOC4Q96A65 974 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 AK8Q96MA6 479 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 WDR24Q96S15 920 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 FAN1Q9Y2M0 1017 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 MESDQ14696 234 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
BDNF-218ENST00000533246 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
BDNF-218ENST00000533246 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
BDNF-218ENST00000533246 TTC26A0AVF1 554 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 GFPT2O94808 682 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 FCER1AP12319 257 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 KLRK1P26718 216 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 CTNNA1P35221 906 aaKnown RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 CDC37Q16543 378 aaPredicted RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 LRRC45Q96CN5 670 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 C21orf2O43822 256 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 GNGT1P63211 74 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 ZBED6P86452 979 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 EEPD1Q7L9B9 569 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 MB21D1Q8N884 522 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 BCAS4Q8TDM0 211 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 EPB41L5Q9HCM4 733 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
BDNF-218ENST00000533246 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 E7EVH7 732 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 GNA14O95837 355 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 CA8P35219 290 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 KRT26Q7Z3Y9 468 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 MPHOSPH6Q99547 160 aaKnown RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 SH2D3AQ9BRG2 576 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 HDAC6Q9UBN7 1215 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 KIDINS220Q9ULH0 1771 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 AP5Z1O43299 807 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 PAX7P23759 505 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 E4F1Q66K89 784 aaPredicted RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 ANKS4BQ8N8V4 417 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 NAP1L3Q99457 506 aaPredicted RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 ALDH8A1Q9H2A2 487 aaPredicted RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
BDNF-218ENST00000533246 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
BDNF-218ENST00000533246 LRRIQ4A6NIV6 560 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 CCT5P48643 541 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 ARL6IP4Q66PJ3 421 aaKnown RBP13.35□□□□□ -0.27
BDNF-218ENST00000533246 METTL13Q8N6R0 699 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 MXD3Q9BW11 206 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 OSBPL5Q9H0X9 879 aaPredicted RBP13.35□□□□□ -0.27
BDNF-218ENST00000533246 ABCB6Q9NP58 842 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 ZNF34Q8IZ26 560 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 ANKRD42Q8N9B4 389 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 CNKSR1Q969H4 720 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 FAM204AQ9H8W3 233 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 EXOC7Q9UPT5 735 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 CD163L1Q9NR16 1453 aa13.35□□□□□ -0.27
BDNF-218ENST00000533246 LAD1O00515 517 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms