RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 EDIL3O43854 480 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 GH1P01241 217 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 CYP3A4P08684 503 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
SSBP3-214ENST00000533209 ACLYP53396 1101 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 FOSBP53539 338 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 KRT40Q6A162 431 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 NLRX1Q86UT6 975 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
SSBP3-214ENST00000533209 CYP2W1Q8TAV3 490 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 JADE2Q9NQC1 790 aa13.68□□□□□ -0.22
SSBP3-214ENST00000533209 A0A1W2PQ45 241 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-214ENST00000533209 A0A1W2PQY0 241 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 MOXD2PA6NHM9 499 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 A6NJR5 290 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 MEIS1O00470 390 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 GGPS1O95749 300 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 MMP1P03956 469 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 ASGR1P07306 291 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-214ENST00000533209 CUL4AQ13619 759 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 CEP55Q53EZ4 464 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 CELF3Q5SZQ8 465 aaKnown RBP13.67□□□□□ -0.22
SSBP3-214ENST00000533209 KRT25Q7Z3Z0 450 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 DHX37Q8IY37 1157 aaKnown RBP13.67□□□□□ -0.22
SSBP3-214ENST00000533209 EMID1Q96A84 441 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-214ENST00000533209 FERMT2Q96AC1 680 aa13.67□□□□□ -0.22
SSBP3-214ENST00000533209 SENP6Q9GZR1 1112 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-214ENST00000533209 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 MAFGO15525 162 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 SORBS3O60504 671 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 ATP9AO75110 1047 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 CIITAP33076 1130 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 CPT1AP50416 773 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 NR5A1Q13285 461 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 MTMR1Q13613 665 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 LAMC2Q13753 1193 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 TRIM29Q14134 588 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 MYSM1Q5VVJ2 828 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 AFG1LQ8WV93 481 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 TNFRSF25Q93038 417 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 SNX21Q969T3 373 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 CDHR1Q96JP9 859 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 KCNH7Q9NS40 1196 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 TNRC18O15417 2968 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-214ENST00000533209 KIAA1217Q5T5P2 1943 aa13.66□□□□□ -0.22
SSBP3-214ENST00000533209 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 IGLV3-22A0A075B6J6 115 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 ZEB2O60315 1214 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 ARP10275 920 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 KCNA2P16389 499 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 KRT2P35908 639 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 ZNF76P36508 570 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 USP11P51784 963 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 GUCY1B3Q02153 619 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 NEDD9Q14511 834 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 NONOQ15233 471 aaKnown RBP eCLIP13.65□□□□□ -0.222e-6■■■□□ 15.7
SSBP3-214ENST00000533209 INF2Q27J81 1249 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 LRRC26Q2I0M4 334 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 EARS2Q5JPH6 523 aaKnown RBP13.65□□□□□ -0.22
SSBP3-214ENST00000533209 CXCL17Q6UXB2 119 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 CYFIP1Q7L576 1253 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 DIS3L2Q8IYB7 885 aaKnown RBP13.65□□□□□ -0.22
SSBP3-214ENST00000533209 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 HTATIP2Q9BUP3 242 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 BRMS1Q9HCU9 246 aa13.65□□□□□ -0.22
SSBP3-214ENST00000533209 CCDC194A0A1B0GVG4 234 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 BTBD18B2RXH4 712 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-214ENST00000533209 MMP3P08254 477 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 MYL3P08590 195 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 HOXD8P13378 290 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-214ENST00000533209 GJB2P29033 226 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-214ENST00000533209 PURAQ00577 322 aaKnown RBP13.64□□□□□ -0.23
SSBP3-214ENST00000533209 HSDL1Q3SXM5 330 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-214ENST00000533209 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 SLC39A5Q6ZMH5 540 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 PIK3AP1Q6ZUJ8 805 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 PLA2G4DQ86XP0 818 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 LENG9Q96B70 501 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 SPATA33Q96N06 139 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 MLXIPQ9HAP2 919 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 TELO2Q9Y4R8 837 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-214ENST00000533209 ELP1O95163 1332 aa13.64□□□□□ -0.23
SSBP3-214ENST00000533209 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 KPNA6O60684 536 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 CABYRO75952 493 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms