RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SPATA33Q96N06 139 aa27.01■■□□□ 1.91
SMPD1-209ENST00000533196 MYO9BQ13459 2157 aa27.01■■□□□ 1.91
SMPD1-209ENST00000533196 SCN5AQ14524 2016 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 HAS3O00219 553 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 CHMP4BP1P59074 171 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 NEDD9Q14511 834 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 MFSD10Q14728 455 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 RAB30Q15771 203 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 PCNX4Q63HM2 1172 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 APOA5Q6Q788 366 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 USP17L6PQ6QN14 398 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 TEX2Q8IWB9 1127 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 RASEFQ8IZ41 740 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 C7orf31Q8N865 590 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 TIFAQ96CG3 184 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 PSTPIP2Q9H939 334 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 MLXIPQ9HAP2 919 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 GTF2IRD1Q9UHL9 959 aa27■■□□□ 1.91
SMPD1-209ENST00000533196 FIBPO43427 364 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 RCAN1P53805 252 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 SP2Q02086 613 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 HSDL1Q3SXM5 330 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 OTOP2Q7RTS6 562 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 CMTR1Q8N1G2 835 aaKnown RBP26.99■■□□□ 1.91
SMPD1-209ENST00000533196 AFAP1L1Q8TED9 768 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 PBX4Q9BYU1 374 aa26.99■■□□□ 1.91
SMPD1-209ENST00000533196 CXXC1Q9P0U4 656 aaPredicted RBP26.99■■□□□ 1.91
SMPD1-209ENST00000533196 SPATA31C2B4DYI2 1134 aa26.98■■□□□ 1.91
SMPD1-209ENST00000533196 IQCF3P0C7M6 154 aa26.98■■□□□ 1.91
SMPD1-209ENST00000533196 ACTN1P12814 892 aa26.98■■□□□ 1.91
SMPD1-209ENST00000533196 KIAA0753Q2KHM9 967 aa26.98■■□□□ 1.91
SMPD1-209ENST00000533196 GDF6Q6KF10 455 aaPredicted RBP26.98■■□□□ 1.91
SMPD1-209ENST00000533196 KCNB2Q92953 911 aa26.98■■□□□ 1.91
SMPD1-209ENST00000533196 VWCEQ96DN2 955 aa26.98■■□□□ 1.91
SMPD1-209ENST00000533196 ZBTB43O43298 467 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 PARNO95453 639 aaKnown RBP26.97■■□□□ 1.91
SMPD1-209ENST00000533196 RBL2Q08999 1139 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 ADCK5Q3MIX3 580 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 METTL7BQ6UX53 244 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 NLRX1Q86UT6 975 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 RAB11FIP4Q86YS3 637 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 PPP1R13LQ8WUF5 828 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 SENP7Q9BQF6 1050 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 ALG1Q9BT22 464 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 ZNF576Q9H609 170 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 HDAC6Q9UBN7 1215 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 MSRAQ9UJ68 235 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 SLC4A7Q9Y6M7 1214 aa26.97■■□□□ 1.91
SMPD1-209ENST00000533196 ZNF286BP0CG31 522 aa26.96■■□□□ 1.91
SMPD1-209ENST00000533196 RTN1Q16799 776 aa26.96■■□□□ 1.91
SMPD1-209ENST00000533196 GPKOWQ92917 476 aaPredicted RBP eCLIP26.96■■□□□ 1.91
SMPD1-209ENST00000533196 ZFP91Q96JP5 570 aaPredicted RBP26.96■■□□□ 1.91
SMPD1-209ENST00000533196 CTAGE1Q96RT6 745 aa26.96■■□□□ 1.91
SMPD1-209ENST00000533196 GBF1Q92538 1859 aa26.96■■□□□ 1.91
SMPD1-209ENST00000533196 TET1Q8NFU7 2136 aa26.95■■□□□ 1.91
SMPD1-209ENST00000533196 GRXCR1A8MXD5 290 aa26.95■■□□□ 1.9
SMPD1-209ENST00000533196 hCG_1984214I3L0E3 225 aa26.95■■□□□ 1.9
SMPD1-209ENST00000533196 CCDC82Q8N4S0 544 aa26.95■■□□□ 1.9
SMPD1-209ENST00000533196 ZNF713Q8N859 430 aaPredicted RBP26.95■■□□□ 1.9
SMPD1-209ENST00000533196 GIMAP8Q8ND71 665 aaPredicted RBP26.95■■□□□ 1.9
SMPD1-209ENST00000533196 CDHR1Q96JP9 859 aa26.95■■□□□ 1.9
SMPD1-209ENST00000533196 C16orf70Q9BSU1 422 aa26.95■■□□□ 1.9
SMPD1-209ENST00000533196 CNTNAP5Q8WYK1 1306 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 NOP56O00567 594 aaKnown RBP26.94■■□□□ 1.9
SMPD1-209ENST00000533196 HSPA4P34932 840 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 PTK7Q13308 1070 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 PPP1R18Q6NYC8 613 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 HEATR3Q7Z4Q2 680 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 DEFB128Q7Z7B8 93 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 MYLIPQ8WY64 445 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 GPRASP2Q96D09 838 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 TCEANC2Q96MN5 208 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 USP26Q9BXU7 913 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 RTEL1Q9NZ71 1219 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 BRPF3Q9ULD4 1205 aa26.94■■□□□ 1.9
SMPD1-209ENST00000533196 DOCK5Q9H7D0 1870 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 SPDYE3A6NKU9 549 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 ZBBXA8MT70 800 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 EPB41L2O43491 1005 aaKnown RBP26.93■■□□□ 1.9
SMPD1-209ENST00000533196 REC8O95072 547 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 NEFLP07196 543 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 SELPP16109 830 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 PBX2P40425 430 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 SEMA3FQ13275 785 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 EHMT1Q9H9B1 1298 aa26.93■■□□□ 1.9
SMPD1-209ENST00000533196 hCG_1642624A0A1W2PR95 340 aa26.92■■□□□ 1.9
SMPD1-209ENST00000533196 FOSL2P15408 326 aa26.92■■□□□ 1.9
SMPD1-209ENST00000533196 CYFIP1Q7L576 1253 aa26.92■■□□□ 1.9
SMPD1-209ENST00000533196 DHX38Q92620 1227 aaKnown RBP26.92■■□□□ 1.9
SMPD1-209ENST00000533196 KAT6AQ92794 2004 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 KLF18A0A0U1RQI7 1052 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 GOLGA8AA7E2F4 631 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 GOLGA8BA8MQT2 603 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 H3BRB1 525 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 SORBS3O60504 671 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 BAIAP3O94812 1187 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 LGALS2P05162 132 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 FGD1P98174 961 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 FUT2Q10981 343 aa26.91■■□□□ 1.9
SMPD1-209ENST00000533196 GRIN2CQ14957 1233 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms