RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ANGEL1Q9UNK9 670 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 CD2APQ9Y5K6 639 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TPD52L2O43399 206 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ANP32DO95626 131 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 HNRNPCP07910 306 aaKnown RBP eCLIP7.44□□□□□ -1.222e-6■■□□□ 12
TGFBR3-209ENST00000532540 TCP1P17987 556 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ADD2P35612 726 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 SNAP25P60880 206 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 WTAPQ15007 396 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 CFAP221Q4G0U5 840 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 RRAGBQ5VZM2 374 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ZNF483Q8TF39 744 aaPredicted RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 WASF1Q92558 559 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ESR2Q92731 530 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TANGO6Q9C0B7 1094 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ANKZF1Q9H8Y5 726 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ZFATQ9P243 1243 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TMEM232C9JQI7 657 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 GRIN3BO60391 1043 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 SKIP12755 728 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 PLCG2P16885 1265 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 CMA1P23946 247 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 MTIF2P46199 727 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 MRPS35P82673 323 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 RASA3Q14644 834 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 OTUD7BQ6GQQ9 843 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 WDR93Q6P2C0 686 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 APLFQ8IW19 511 aaPredicted RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TEX9Q8N6V9 391 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 NOA1Q8NC60 698 aaKnown RBP7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 C3orf20Q8ND61 904 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 STAP2Q9UGK3 403 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 TAF6LQ9Y6J9 622 aa7.44□□□□□ -1.22
TGFBR3-209ENST00000532540 ATP10DQ9P241 1426 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 FRMPD2Q68DX3 1309 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 CTNND1O60716 968 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 FAM107AO95990 144 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 ALDH3A1P30838 453 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 ROR2Q01974 943 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 SNX1Q13596 522 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 TMC4Q7Z404 712 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 TRIM42Q8IWZ5 723 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 CLIC6Q96NY7 704 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 PAGR1Q9BTK6 254 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 SLC26A6Q9BXS9 759 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 PICK1Q9NRD5 415 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 ASTN2O75129 1339 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 YBX3P16989 372 aaKnown RBP eCLIP7.43□□□□□ -1.228e-7■■■□□ 15.9
TGFBR3-209ENST00000532540 CASP14P31944 242 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 MDH1P40925 334 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 PSMC4P43686 418 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 EVX2Q03828 476 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 PPARAQ07869 468 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 C2orf54Q08AI8 447 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 DHX32Q7L7V1 743 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 ADGRA1Q86SQ6 560 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 OR8K1Q8NGG5 319 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 FAM81AQ8TBF8 368 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 HAUS1Q96CS2 278 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 RNF41Q9H4P4 317 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 DAGLAQ9Y4D2 1042 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 SYNRGQ9UMZ2 1314 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 ATP2A2P16615 1042 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 SEC24CP53992 1094 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 RBL2Q08999 1139 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 TMED1Q13445 227 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 MOB2Q70IA6 237 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 FUKQ8N0W3 1084 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 SH2D3CQ8N5H7 860 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 KCNV2Q8TDN2 545 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 CTNNBL1Q8WYA6 563 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 EZH1Q92800 747 aaPredicted RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 ZNF287Q9HBT7 754 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 DDX20Q9UHI6 824 aaKnown RBP7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 HYOU1Q9Y4L1 999 aa7.43□□□□□ -1.22
TGFBR3-209ENST00000532540 UTYO14607 1347 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 SUN1O94901 812 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CYP21A2P08686 494 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 AARSP49588 968 aaKnown RBP eCLIP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 SESN3P58005 492 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 GUCY2DQ02846 1103 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 FMR1Q06787 632 aaKnown RBP eCLIP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 KLC1Q07866 573 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 INF2Q27J81 1249 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ARMC3Q5W041 872 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CCNI2Q6ZMN8 369 aaPredicted RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 SPATA21Q7Z572 469 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 FBXO33Q7Z6M2 555 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CATIPQ7Z7H3 387 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ARHGAP18Q8N392 663 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ARHGEF2Q92974 986 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 PHKBQ93100 1093 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 NSUN4Q96CB9 384 aaKnown RBP7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 CDK5RAP3Q96JB5 506 aa7.42□□□□□ -1.22
TGFBR3-209ENST00000532540 ALG1Q9BT22 464 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms