RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 MCM6Q14566 821 aa12.24□□□□□ -0.45
BRPF3-209ENST00000532330 EPHA7Q15375 998 aa12.24□□□□□ -0.45
BRPF3-209ENST00000532330 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
BRPF3-209ENST00000532330 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
BRPF3-209ENST00000532330 C16orf45Q96MC5 204 aaPredicted RBP12.24□□□□□ -0.45
BRPF3-209ENST00000532330 PNMA5Q96PV4 448 aa12.24□□□□□ -0.45
BRPF3-209ENST00000532330 NOC4LQ9BVI4 516 aaKnown RBP12.24□□□□□ -0.45
BRPF3-209ENST00000532330 SSBP05455 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CD44P16070 742 aaKnown RBP12.23□□□□□ -0.45
BRPF3-209ENST00000532330 COPB2P35606 906 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 PRELPP51888 382 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 NLRX1Q86UT6 975 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CCDC170Q8IYT3 715 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CCDC43Q96MW1 224 aaKnown RBP12.23□□□□□ -0.45
BRPF3-209ENST00000532330 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CETN3O15182 167 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 GAS7O60861 476 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 PBX1P40424 430 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 EPS15P42566 896 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 SNRPFP62306 86 aaKnown RBP12.23□□□□□ -0.45
BRPF3-209ENST00000532330 ETF1P62495 437 aaKnown RBP12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 VWA3BQ502W6 1294 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 NCAPH2Q6IBW4 605 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 DDX12PQ92771 950 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 PPP1R13BQ96KQ4 1090 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 TUBGCP2Q9BSJ2 902 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 MMTAG2Q9BU76 263 aaKnown RBP12.23□□□□□ -0.45
BRPF3-209ENST00000532330 KIAA1024Q9UPX6 916 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 A0A087WWV3 80 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 FZD9O00144 591 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CDK17Q00537 523 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 PPP2R5CQ13362 524 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CLEC10AQ8IUN9 316 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 SCYL3Q8IZE3 742 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 SIPA1L1O43166 1804 aa12.23□□□□□ -0.45
BRPF3-209ENST00000532330 CFBP00751 764 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 FECHP22830 423 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CASQ1P31415 396 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CEP55Q53EZ4 464 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 LRCH2Q5VUJ6 765 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 SYT2Q8N9I0 419 aaPredicted RBP12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 STAMQ92783 540 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CNOT7Q9UIV1 285 aaKnown RBP12.22□□□□□ -0.45
BRPF3-209ENST00000532330 ODF2LQ9ULJ1 636 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 FAM196BA6NMK8 535 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 TUBBP07437 444 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 PTGER2P43116 358 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CCDC40Q4G0X9 1142 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 HAS1Q92839 578 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 SLC5A5Q92911 643 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
BRPF3-209ENST00000532330 ERGIC2Q96RQ1 377 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 PPP2R2CQ9Y2T4 447 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 EIF3DO15371 548 aaKnown RBP eCLIP12.22□□□□□ -0.45
BRPF3-209ENST00000532330 SFNP31947 248 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 JAK3P52333 1124 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 ZBED6P86452 979 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 ETNPPLQ8TBG4 499 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 MYMKA6NI61 221 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 FAM13AO94988 1023 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 NF2P35240 595 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
BRPF3-209ENST00000532330 COASYQ13057 564 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 TAB2Q9NYJ8 693 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
BRPF3-209ENST00000532330 SLU7O95391 586 aaKnown RBP12.21□□□□□ -0.45
BRPF3-209ENST00000532330 TRIM21P19474 475 aaKnown RBP12.21□□□□□ -0.45
BRPF3-209ENST00000532330 HSD17B4P51659 736 aa12.21□□□□□ -0.45
BRPF3-209ENST00000532330 ARHGAP29Q52LW3 1261 aa12.21□□□□□ -0.45
BRPF3-209ENST00000532330 HERC4Q5GLZ8 1057 aaPredicted RBP12.21□□□□□ -0.45
BRPF3-209ENST00000532330 GPC2Q8N158 579 aa12.21□□□□□ -0.45
BRPF3-209ENST00000532330 TMEM39BQ9GZU3 492 aa12.21□□□□□ -0.45
BRPF3-209ENST00000532330 ARGLU1Q9NWB6 273 aaPredicted RBP12.21□□□□□ -0.45
BRPF3-209ENST00000532330 POTEMA6NI47 508 aa12.21□□□□□ -0.46
BRPF3-209ENST00000532330 SLC16A3O15427 465 aaKnown RBP12.21□□□□□ -0.46
BRPF3-209ENST00000532330 ZBTB7AO95365 584 aa12.21□□□□□ -0.46
BRPF3-209ENST00000532330 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.46
BRPF3-209ENST00000532330 ANXA13P27216 316 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms