RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
NXF1-212ENST00000531872 EP400NLQ6ZTU2 488 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 CHST3Q7LGC8 479 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 RNF135Q8IUD6 432 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 YME1L1Q96TA2 773 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 PRRX2Q99811 253 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 TMEM47Q9BQJ4 181 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 ALG1Q9BT22 464 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 GPCPD1Q9NPB8 672 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
NXF1-212ENST00000531872 ANAPC4Q9UJX5 808 aa9.18□□□□□ -0.94
NXF1-212ENST00000531872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
NXF1-212ENST00000531872 RSPH10B2B2RC85 870 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 C5orf67F2Z3F1 127 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 ORC4O43929 436 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 RANBP6O60518 1105 aaKnown RBP9.17□□□□□ -0.94
NXF1-212ENST00000531872 RSPH10BP0C881 870 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 SNHG28P0DPA3 235 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 TOP1P11387 765 aaKnown RBP9.17□□□□□ -0.94
NXF1-212ENST00000531872 DLX2Q07687 328 aaPredicted RBP9.17□□□□□ -0.94
NXF1-212ENST00000531872 HYAL1Q12794 435 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 SMAD4Q13485 552 aaKnown RBP9.17□□□□□ -0.94
NXF1-212ENST00000531872 STXBP2Q15833 593 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 ZMYM1Q5SVZ6 1142 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 SERINC5Q86VE9 423 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 PPTC7Q8NI37 304 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 TAAR1Q96RJ0 339 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 IWS1Q96ST2 819 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 ALG13Q9NP73 1137 aaKnown RBP9.17□□□□□ -0.94
NXF1-212ENST00000531872 TCP11L1Q9NUJ3 509 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 CACNA1HO95180 2353 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 ZDBF2Q9HCK1 2354 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 ATG2AQ2TAZ0 1938 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 KIAA1217Q5T5P2 1943 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 RALGAPA2Q2PPJ7 1873 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 NLRC5Q86WI3 1866 aa9.17□□□□□ -0.94
NXF1-212ENST00000531872 TMEM221A6NGB7 291 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 M0R296 226 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 RB1P06400 928 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 LINC00271P0C7V0 271 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 ZNF286BP0CG31 522 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 HOXC8P31273 242 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 FOXK2Q01167 660 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 ZNF543Q08ER8 600 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 LAMC2Q13753 1193 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 TRIM67Q6ZTA4 783 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
NXF1-212ENST00000531872 NSUN6Q8TEA1 469 aaKnown RBP9.16□□□□□ -0.94
NXF1-212ENST00000531872 TBC1D5Q92609 795 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 GPATCH3Q96I76 525 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 COL20A1Q9P218 1284 aa9.16□□□□□ -0.94
NXF1-212ENST00000531872 ZFHX2Q9C0A1 2572 aaPredicted RBP9.16□□□□□ -0.94
NXF1-212ENST00000531872 STXBP3O00186 592 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 GRM6O15303 877 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 TBX10O75333 385 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 PPFIA4O75335 1185 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 EIF3JO75822 258 aaKnown RBP9.15□□□□□ -0.94
NXF1-212ENST00000531872 UPP2O95045 317 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 EYA4O95677 639 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 THPOP40225 353 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 CLUL1Q15846 466 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.94
NXF1-212ENST00000531872 SEPT8Q92599 483 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 MSLNLQ96KJ4 702 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 RMDN3Q96TC7 470 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 OSBPL7Q9BZF2 842 aa9.15□□□□□ -0.94
NXF1-212ENST00000531872 CHMP4BQ9H444 224 aaKnown RBP9.15□□□□□ -0.94
NXF1-212ENST00000531872 DCHS1Q96JQ0 3298 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 ABCB11O95342 1321 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 SPTBN4Q9H254 2564 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 LOC730098B7Z3J9 87 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 GFRA3O60609 400 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 CAND2O75155 1236 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 ATXN8OSP0DMR3 200 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 CTNNB1P35222 781 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 GTF2F1P35269 517 aaKnown RBP eCLIP9.14□□□□□ -0.95
NXF1-212ENST00000531872 BMPR1AP36894 532 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 ZXDAP98168 799 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 ADAM15Q13444 863 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 CBX2Q14781 532 aaPredicted RBP9.14□□□□□ -0.95
NXF1-212ENST00000531872 ALX1Q15699 326 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 HSDL1Q3SXM5 330 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 USH1GQ495M9 461 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 GPATCH4Q5T3I0 446 aaKnown RBP9.14□□□□□ -0.95
NXF1-212ENST00000531872 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 MYSM1Q5VVJ2 828 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
NXF1-212ENST00000531872 FBXL6Q8N531 539 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 PI4K2BQ8TCG2 481 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
NXF1-212ENST00000531872 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 TTC14Q96N46 770 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 C16orf70Q9BSU1 422 aa9.14□□□□□ -0.95
NXF1-212ENST00000531872 C11orf84Q9BUA3 381 aaPredicted RBP9.14□□□□□ -0.95
NXF1-212ENST00000531872 IFIH1Q9BYX4 1025 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms