RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PTK7Q13308 1070 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 LAMC2Q13753 1193 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 CCDC178Q5BJE1 867 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 ZNF618Q5T7W0 954 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 B4GALNT3Q6L9W6 998 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 FAM117BQ6P1L5 589 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 DHX37Q8IY37 1157 aaKnown RBP20.19■□□□□ 0.82
PKP3-208ENST00000531857 STAG2Q8N3U4 1231 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 PPTC7Q8NI37 304 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 RAD9AQ99638 391 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 LRFN3Q9BTN0 628 aa20.19■□□□□ 0.82
PKP3-208ENST00000531857 NLRC5Q86WI3 1866 aa20.18■□□□□ 0.82
PKP3-208ENST00000531857 LINC01553A4QN01 128 aa20.18■□□□□ 0.82
PKP3-208ENST00000531857 PPP1R11O60927 126 aaPredicted RBP20.18■□□□□ 0.82
PKP3-208ENST00000531857 HSD17B4P51659 736 aa20.18■□□□□ 0.82
PKP3-208ENST00000531857 ERVK-21P61565 698 aa20.18■□□□□ 0.82
PKP3-208ENST00000531857 KATNAL1Q9BW62 490 aa20.18■□□□□ 0.82
PKP3-208ENST00000531857 LMCD1Q9NZU5 365 aa20.18■□□□□ 0.82
PKP3-208ENST00000531857 MYCLP12524 364 aaPredicted RBP20.17■□□□□ 0.82
PKP3-208ENST00000531857 HOXD8P13378 290 aaPredicted RBP20.17■□□□□ 0.82
PKP3-208ENST00000531857 IKBKEQ14164 716 aa20.17■□□□□ 0.82
PKP3-208ENST00000531857 HSDL1Q3SXM5 330 aa20.17■□□□□ 0.82
PKP3-208ENST00000531857 MYSM1Q5VVJ2 828 aa20.17■□□□□ 0.82
PKP3-208ENST00000531857 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.17■□□□□ 0.82
PKP3-208ENST00000531857 PLEKHM2Q8IWE5 1019 aa20.17■□□□□ 0.82
PKP3-208ENST00000531857 TGS1Q96RS0 853 aaKnown RBP20.17■□□□□ 0.82
PKP3-208ENST00000531857 PDCD2LQ9BRP1 358 aa20.17■□□□□ 0.82
PKP3-208ENST00000531857 CD320Q9NPF0 282 aa20.17■□□□□ 0.82
PKP3-208ENST00000531857 NT5C2P49902 561 aa20.16■□□□□ 0.82
PKP3-208ENST00000531857 SP2Q02086 613 aa20.16■□□□□ 0.82
PKP3-208ENST00000531857 GHRHRQ02643 423 aa20.16■□□□□ 0.82
PKP3-208ENST00000531857 IL31RAQ8NI17 732 aa20.16■□□□□ 0.82
PKP3-208ENST00000531857 ZFP91Q96JP5 570 aaPredicted RBP20.16■□□□□ 0.82
PKP3-208ENST00000531857 AMNQ9BXJ7 453 aa20.16■□□□□ 0.82
PKP3-208ENST00000531857 EFCAB14O75071 495 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 PPFIA4O75335 1185 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 LGR5O75473 907 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 HOXA13P31271 388 aaPredicted RBP20.15■□□□□ 0.82
PKP3-208ENST00000531857 CELF3Q5SZQ8 465 aaKnown RBP20.15■□□□□ 0.82
PKP3-208ENST00000531857 STOX1Q6ZVD7 989 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 GPKOWQ92917 476 aaPredicted RBP eCLIP20.15■□□□□ 0.82
PKP3-208ENST00000531857 SPATA33Q96N06 139 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 OSBPL3Q9H4L5 887 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 C11orf16Q9NQ32 467 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 DIAPH3Q9NSV4 1193 aa20.15■□□□□ 0.82
PKP3-208ENST00000531857 ATG2AQ2TAZ0 1938 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 KLRF2D3W0D1 207 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 GGPS1O95749 300 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 MKRN4PQ13434 485 aaPredicted RBP20.14■□□□□ 0.81
PKP3-208ENST00000531857 PGM5Q15124 567 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
PKP3-208ENST00000531857 VSIG10LQ86VR7 867 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 MTMR8Q96EF0 704 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 C17orf80Q9BSJ5 609 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 UBAC1Q9BSL1 405 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 C16orf70Q9BSU1 422 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 DSCC1Q9BVC3 393 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 BCAS3Q9H6U6 928 aa20.14■□□□□ 0.81
PKP3-208ENST00000531857 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.13■□□□□ 0.81
PKP3-208ENST00000531857 UBA1P22314 1058 aaKnown RBP20.13■□□□□ 0.81
PKP3-208ENST00000531857 THPOP40225 353 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 SEC23AQ15436 765 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 SLC35G1Q2M3R5 365 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 TMEM31Q5JXX7 168 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 IFIT1BQ5T764 474 aaKnown RBP20.13■□□□□ 0.81
PKP3-208ENST00000531857 SERINC5Q86VE9 423 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 CHD1LQ86WJ1 897 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 DBF4BQ8NFT6 615 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 KRT23Q9C075 422 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 UBE2ZQ9H832 354 aaPredicted RBP20.13■□□□□ 0.81
PKP3-208ENST00000531857 MAD2L2Q9UI95 211 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 INSL6Q9Y581 213 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 PCDHA1Q9Y5I3 950 aa20.13■□□□□ 0.81
PKP3-208ENST00000531857 KAT6AQ92794 2004 aa20.12■□□□□ 0.81
PKP3-208ENST00000531857 FAM86C2PA6NEL3 165 aa20.12■□□□□ 0.81
PKP3-208ENST00000531857 OSBPL7Q9BZF2 842 aa20.12■□□□□ 0.81
PKP3-208ENST00000531857 IL25Q9H293 177 aa20.12■□□□□ 0.81
PKP3-208ENST00000531857 RALGAPA2Q2PPJ7 1873 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 EMSYQ7Z589 1322 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 PALM3A6NDB9 673 aaPredicted RBP20.11■□□□□ 0.81
PKP3-208ENST00000531857 RSPH10B2B2RC85 870 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 ZBTB5O15062 677 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 IGHDP01880 384 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 RSPH10BP0C881 870 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 KCNV1Q6PIU1 500 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 CYB5R4Q7L1T6 521 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 MYOCDQ8IZQ8 938 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 FBXO22Q8NEZ5 403 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.11■□□□□ 0.81
PKP3-208ENST00000531857 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
PKP3-208ENST00000531857 CTNNA3Q9UI47 895 aa20.11■□□□□ 0.81
PKP3-208ENST00000531857 AMHP03971 560 aa20.1■□□□□ 0.81
PKP3-208ENST00000531857 KCNA5P22460 613 aa20.1■□□□□ 0.81
PKP3-208ENST00000531857 HTRA4P83105 476 aaPredicted RBP20.1■□□□□ 0.81
PKP3-208ENST00000531857 NUCB1Q02818 461 aa20.1■□□□□ 0.81
PKP3-208ENST00000531857 PLEKHG4Q58EX7 1191 aa20.1■□□□□ 0.81
PKP3-208ENST00000531857 FCHSD1Q86WN1 690 aa20.1■□□□□ 0.81
PKP3-208ENST00000531857 HOMER1Q86YM7 354 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms