RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 FAM135BQ49AJ0 1406 aa7.66□□□□□ -1.18
CASP4-210ENST00000531546 LRP6O75581 1613 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 FSHBP01225 129 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 KIF14Q15058 1648 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 CCDC27Q2M243 656 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 TBC1D10BQ4KMP7 808 aaPredicted RBP7.65□□□□□ -1.18
CASP4-210ENST00000531546 BORAQ6PGQ7 559 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 FAM124AQ86V42 546 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 LGI4Q8N135 537 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 LINC00482Q8N8I6 264 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 FAM135AQ9P2D6 1515 aa7.65□□□□□ -1.18
CASP4-210ENST00000531546 XIRP1Q702N8 1843 aaKnown RBP7.64□□□□□ -1.19
CASP4-210ENST00000531546 DEPDC5O75140 1603 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 RGS12O14924 1447 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 EEA1Q15075 1411 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 GUCY2CP25092 1073 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 RGL3Q3MIN7 710 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 FAM26FQ5R3K3 315 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 WWC2Q6AWC2 1192 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
CASP4-210ENST00000531546 DVL3Q92997 716 aaPredicted RBP7.64□□□□□ -1.19
CASP4-210ENST00000531546 FAM86C1Q9NVL1 165 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 WHRNQ9P202 907 aa7.64□□□□□ -1.19
CASP4-210ENST00000531546 UGGT1Q9NYU2 1555 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 TRBV23OR9-2A0A075B6M9 112 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 AURKAO14965 403 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 YY1P25490 414 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 SMAD4Q13485 552 aaKnown RBP7.63□□□□□ -1.19
CASP4-210ENST00000531546 UNC5AQ6ZN44 842 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 DDX11Q96FC9 970 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 SORCS2Q96PQ0 1159 aa7.63□□□□□ -1.19
CASP4-210ENST00000531546 GZF1Q9H116 711 aaPredicted RBP7.63□□□□□ -1.19
CASP4-210ENST00000531546 CDK12Q9NYV4 1490 aaPredicted RBP7.62□□□□□ -1.19
CASP4-210ENST00000531546 RPL13P26373 211 aaKnown RBP7.62□□□□□ -1.19
CASP4-210ENST00000531546 GDF5P43026 501 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 SEPHS1P49903 392 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 PPP2R5DQ14738 602 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 USP33Q8TEY7 942 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 FBLN5Q9UBX5 448 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 ZNF214Q9UL59 606 aaPredicted RBP7.62□□□□□ -1.19
CASP4-210ENST00000531546 BACE2Q9Y5Z0 518 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 MED14O60244 1454 aa7.62□□□□□ -1.19
CASP4-210ENST00000531546 AFF2P51816 1311 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 STXBP3O00186 592 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 CBFA2T2O43439 604 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 C6P13671 934 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 THBS2P35442 1172 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 ZYXQ15942 572 aaKnown RBP7.61□□□□□ -1.19
CASP4-210ENST00000531546 DCP2Q8IU60 420 aaKnown RBP7.61□□□□□ -1.19
CASP4-210ENST00000531546 RBBP8NLQ8NC74 664 aaPredicted RBP7.61□□□□□ -1.19
CASP4-210ENST00000531546 MTA3Q9BTC8 594 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 GBP3Q9H0R5 595 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.61□□□□□ -1.19
CASP4-210ENST00000531546 INVSQ9Y283 1065 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 CDC42BPBQ9Y5S2 1711 aa7.61□□□□□ -1.19
CASP4-210ENST00000531546 ZNF536O15090 1300 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 SPAG9O60271 1321 aaKnown RBP7.6□□□□□ -1.19
CASP4-210ENST00000531546 SPATA31A6Q5VVP1 1343 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 MROH6A6NGR9 719 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 C8BP07358 591 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 TACR2P21452 398 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 MRPL58Q14197 206 aaKnown RBP7.6□□□□□ -1.19
CASP4-210ENST00000531546 GLB1LQ6UWU2 654 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 ETV3LQ6ZN32 361 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 GORASP1Q9BQQ3 440 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 C11orf84Q9BUA3 381 aaPredicted RBP7.6□□□□□ -1.19
CASP4-210ENST00000531546 GULP1Q9UBP9 304 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 LRRC9Q6ZRR7 1453 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 CLIP1P30622 1438 aa7.6□□□□□ -1.19
CASP4-210ENST00000531546 PAMP19021 973 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 HMGA2P52926 109 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 SURF1Q15526 300 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 FBXW10Q5XX13 1052 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 KYQ8NBH2 561 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 KISS1RQ969F8 398 aaPredicted RBP7.59□□□□□ -1.19
CASP4-210ENST00000531546 HAUS7Q99871 368 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 CDK11AQ9UQ88 783 aaPredicted RBP7.59□□□□□ -1.19
CASP4-210ENST00000531546 SLC12A7Q9Y666 1083 aa7.59□□□□□ -1.19
CASP4-210ENST00000531546 SAMD9LQ8IVG5 1584 aa7.59□□□□□ -1.2
CASP4-210ENST00000531546 TMEM94Q12767 1356 aa7.59□□□□□ -1.2
CASP4-210ENST00000531546 A2MP01023 1474 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 NPHS1O60500 1241 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 ZNF326Q5BKZ1 582 aaKnown RBP7.58□□□□□ -1.2
CASP4-210ENST00000531546 ZC3H18Q86VM9 953 aaKnown RBP7.58□□□□□ -1.2
CASP4-210ENST00000531546 TTLL6Q8N841 843 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 ADCY4Q8NFM4 1077 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 C8orf37Q96NL8 207 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 MCMBPQ9BTE3 642 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 AP5M1Q9H0R1 490 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 LRP5O75197 1615 aa7.58□□□□□ -1.2
CASP4-210ENST00000531546 KDM5DQ9BY66 1539 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 ZC3H13Q5T200 1668 aaKnown RBP7.57□□□□□ -1.2
CASP4-210ENST00000531546 COL16A1Q07092 1604 aaPredicted RBP7.57□□□□□ -1.2
CASP4-210ENST00000531546 PREX2Q70Z35 1606 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 NPHP3-ACAD11A0A0J9YXS1 232 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 C2orf71A6NGG8 1288 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 CYR61O00622 381 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
CASP4-210ENST00000531546 AMPD2Q01433 879 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 GRB10Q13322 594 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms