RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CWC22Q9HCG8 908 aaKnown RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PI4KBQ9UBF8 816 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 PRKAG2Q9UGJ0 569 aa8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 DDX20Q9UHI6 824 aaKnown RBP8.4□□□□□ -1.06
TRIM53CP-201ENST00000531490 CNTNAP5Q8WYK1 1306 aa8.4□□□□□ -1.07
TRIM53CP-201ENST00000531490 PHIPQ8WWQ0 1821 aa8.4□□□□□ -1.07
TRIM53CP-201ENST00000531490 MAST2Q6P0Q8 1798 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 DNM1LO00429 736 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 IGSF3O75054 1194 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 IRS1P35568 1242 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 USP5P45974 858 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 AAMPQ13685 434 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 FCHSD1Q86WN1 690 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 SDR42E1Q8WUS8 393 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 VTI1AQ96AJ9 217 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 SLC30A3Q99726 388 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 KLK14Q9P0G3 267 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 BTBD7Q9P203 1132 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 ZBTB21Q9ULJ3 1066 aa8.39□□□□□ -1.07
TRIM53CP-201ENST00000531490 PLXNB2O15031 1838 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 ASNSP08243 561 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 MX1P20591 662 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 ADCYAP1R1P41586 468 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 PDE1AP54750 535 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 SMAD3P84022 425 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 UBE3CQ15386 1083 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 PRAMEF19Q5SWL8 479 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 SLC39A5Q6ZMH5 540 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 METTL16Q86W50 562 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 FOXP4Q8IVH2 680 aaPredicted RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 KBTBD3Q8NAB2 608 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 PPM1EQ8WY54 764 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 LPAR1Q92633 364 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 OSBP2Q969R2 916 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 SEC62Q99442 399 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 DHX36Q9H2U1 1008 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 PDLIM7Q9NR12 457 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 HERC5Q9UII4 1024 aaKnown RBP8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 TTC41PQ6P2S7 1318 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 PTPRFP10586 1907 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 ATAD5Q96QE3 1844 aa8.38□□□□□ -1.07
TRIM53CP-201ENST00000531490 DOCK1Q14185 1865 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 SLC15A5A6NIM6 579 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 C19orf81C9J6K1 198 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 TGFBR3LH3BV60 316 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 MBD4O95243 580 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 GH2P01242 217 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 CYP2D6P10635 497 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 NUCB1Q02818 461 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 TLE2Q04725 743 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 SPEM2Q0P670 501 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 IER5Q5VY09 327 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 SYT9Q86SS6 491 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 CRACR2BQ8N4Y2 399 aaPredicted RBP8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 BEND7Q8N7W2 519 aaPredicted RBP8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 ACER1Q8TDN7 264 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 MYO19Q96H55 970 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 STRBPQ96SI9 672 aaKnown RBP8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 DCP1AQ9NPI6 582 aaPredicted RBP8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 MCM9Q9NXL9 1143 aa8.37□□□□□ -1.07
TRIM53CP-201ENST00000531490 CYP2D7A0A087X1C5 515 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 RNF113AO15541 343 aaKnown RBP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 GLRX3O76003 335 aaKnown RBP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 IGHA2P01877 340 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 CYBAP13498 195 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 HOXB4P17483 251 aaPredicted RBP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 GRB14Q14449 540 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 TMED8Q6PL24 325 aaPredicted RBP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 CHD1LQ86WJ1 897 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 RNPC3Q96LT9 517 aaKnown RBP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 FEZ1Q99689 392 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 CRNKL1Q9BZJ0 848 aaKnown RBP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 NCOR1O75376 2440 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 CHD9Q3L8U1 2897 aa8.36□□□□□ -1.07
TRIM53CP-201ENST00000531490 TMEM265A0A087WTH1 108 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 GRXCR1A8MXD5 290 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 M0R2C6 588 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 ERC2O15083 957 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 COBLO75128 1261 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 POLR3DP05423 398 aaPredicted RBP8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 HOXC6P09630 235 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 VCAM1P19320 739 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 AMPD1P23109 780 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 SHMT1P34896 483 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 CCNA1P78396 465 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 GABPAQ06546 454 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 RAB3GAP1Q15042 981 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 LRRC41Q15345 812 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 FAM47AQ5JRC9 791 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 ZSCAN25Q6NSZ9 544 aa8.35□□□□□ -1.07
TRIM53CP-201ENST00000531490 TATDN1Q6P1N9 297 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms