RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SETQ01105 290 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-205ENST00000531303 DTHD1Q6ZMT9 781 aa21.54■■□□□ 1.04
SMPD1-205ENST00000531303 NIPA1Q7RTP0 329 aa21.54■■□□□ 1.04
SMPD1-205ENST00000531303 ZNF467Q7Z7K2 595 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-205ENST00000531303 FBXO16Q8IX29 292 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-205ENST00000531303 ERO1AQ96HE7 468 aa21.54■■□□□ 1.04
SMPD1-205ENST00000531303 APBA2Q99767 749 aa21.54■■□□□ 1.04
SMPD1-205ENST00000531303 ZNF577Q9BSK1 485 aa21.54■■□□□ 1.04
SMPD1-205ENST00000531303 ELP1O95163 1332 aa21.54■■□□□ 1.04
SMPD1-205ENST00000531303 LAD1O00515 517 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 STAM2O75886 525 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 HOXC6P09630 235 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 TECP42680 631 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 GNPTABQ3T906 1256 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 SPECC1Q5M775 1068 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 TMEM87AQ8NBN3 555 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 ETNPPLQ8TBG4 499 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 INPP4AQ96PE3 977 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-205ENST00000531303 TINF2Q9BSI4 451 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 KCNMB3Q9NPA1 279 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-205ENST00000531303 FLRT1Q9NZU1 646 aa21.53■■□□□ 1.04
SMPD1-205ENST00000531303 SRPRBQ9Y5M8 271 aaKnown RBP21.53■■□□□ 1.04
SMPD1-205ENST00000531303 NFKBIBQ15653 356 aa21.52■■□□□ 1.04
SMPD1-205ENST00000531303 ARL6IP4Q66PJ3 421 aaKnown RBP21.52■■□□□ 1.04
SMPD1-205ENST00000531303 MORC4Q8TE76 937 aa21.52■■□□□ 1.04
SMPD1-205ENST00000531303 FERMT2Q96AC1 680 aa21.52■■□□□ 1.04
SMPD1-205ENST00000531303 GPRASP2Q96D09 838 aa21.52■■□□□ 1.04
SMPD1-205ENST00000531303 TTC12Q9H892 705 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-205ENST00000531303 AGO4Q9HCK5 861 aaKnown RBP21.52■■□□□ 1.04
SMPD1-205ENST00000531303 LMBRD1Q9NUN5 540 aa21.52■■□□□ 1.04
SMPD1-205ENST00000531303 LOC102724159A0A0B4J2E5 919 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 DDX39AO00148 427 aaKnown RBP21.52■■□□□ 1.03
SMPD1-205ENST00000531303 IPO5O00410 1097 aaKnown RBP21.52■■□□□ 1.03
SMPD1-205ENST00000531303 SORBS3O60504 671 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 CUTAO60888 179 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 HOXD10P28358 340 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 PRPHP41219 470 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 SEMA3FQ13275 785 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 PWP2Q15269 919 aaKnown RBP21.52■■□□□ 1.03
SMPD1-205ENST00000531303 AXDND1Q5T1B0 1012 aaPredicted RBP21.52■■□□□ 1.03
SMPD1-205ENST00000531303 MAMDC4Q6UXC1 1216 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 FAM20AQ96MK3 541 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 CSRNP2Q9H175 543 aa21.52■■□□□ 1.03
SMPD1-205ENST00000531303 DOCK5Q9H7D0 1870 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 CEP350Q5VT06 3117 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 TBX3O15119 743 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 ATP9AO75110 1047 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 SNAI1O95863 264 aaPredicted RBP21.51■■□□□ 1.03
SMPD1-205ENST00000531303 CYP2C19P33261 490 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 TMEM266Q2M3C6 531 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 LRCH2Q5VUJ6 765 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 SLFN12Q8IYM2 578 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 SLC5A5Q92911 643 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 PDGFCQ9NRA1 345 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 SRRDQ9UH36 339 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 PCDHA12Q9UN75 941 aa21.51■■□□□ 1.03
SMPD1-205ENST00000531303 DDX11L8A8MPP1 907 aa21.5■■□□□ 1.03
SMPD1-205ENST00000531303 SPATA31C2B4DYI2 1134 aa21.5■■□□□ 1.03
SMPD1-205ENST00000531303 GAS7O60861 476 aa21.5■■□□□ 1.03
SMPD1-205ENST00000531303 PRAMEF19Q5SWL8 479 aa21.5■■□□□ 1.03
SMPD1-205ENST00000531303 ZHX1Q9UKY1 873 aaPredicted RBP21.5■■□□□ 1.03
SMPD1-205ENST00000531303 SYNGAP1Q96PV0 1343 aa21.49■■□□□ 1.03
SMPD1-205ENST00000531303 CASP8AP2Q9UKL3 1982 aa21.49■■□□□ 1.03
SMPD1-205ENST00000531303 ITGB3BPQ13352 177 aaPredicted RBP21.49■■□□□ 1.03
SMPD1-205ENST00000531303 ARHGEF6Q15052 776 aa21.49■■□□□ 1.03
SMPD1-205ENST00000531303 ADALQ6DHV7 355 aa21.49■■□□□ 1.03
SMPD1-205ENST00000531303 CDHR1Q96JP9 859 aa21.49■■□□□ 1.03
SMPD1-205ENST00000531303 MORC2Q9Y6X9 1032 aaPredicted RBP21.49■■□□□ 1.03
SMPD1-205ENST00000531303 POTEMA6NI47 508 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 PP2D1A8MPX8 630 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 CHMP2AO43633 222 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 XRCC5P13010 732 aaKnown RBP21.48■■□□□ 1.03
SMPD1-205ENST00000531303 CDC25AP30304 524 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 UBE2HP62256 183 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 SP2Q02086 613 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 OLFML2BQ68BL8 750 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 SHC4Q6S5L8 630 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 MSL3Q8N5Y2 521 aaKnown RBP21.48■■□□□ 1.03
SMPD1-205ENST00000531303 TEKT3Q9BXF9 490 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 BCAS3Q9H6U6 928 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 VTA1Q9NP79 307 aa21.48■■□□□ 1.03
SMPD1-205ENST00000531303 MAFGO15525 162 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 PSMD10O75832 226 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 ICAM3P32942 547 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 FXR2P51116 673 aaKnown RBP eCLIP21.47■■□□□ 1.03
SMPD1-205ENST00000531303 LY6KQ17RY6 165 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 NCAPH2Q6IBW4 605 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 USP49Q70CQ1 688 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 FSIP1Q8NA03 581 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 RAET1EQ8TD07 263 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 EPSTI1Q96J88 318 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 SDF4Q9BRK5 362 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 TRIM17Q9Y577 477 aa21.47■■□□□ 1.03
SMPD1-205ENST00000531303 A0A1B0GVL5 298 aa21.46■■□□□ 1.03
SMPD1-205ENST00000531303 ARIH2O95376 493 aa21.46■■□□□ 1.03
SMPD1-205ENST00000531303 ELNP15502 786 aa21.46■■□□□ 1.03
SMPD1-205ENST00000531303 KCNA2P16389 499 aa21.46■■□□□ 1.03
SMPD1-205ENST00000531303 LONP1P36776 959 aaKnown RBP21.46■■□□□ 1.03
SMPD1-205ENST00000531303 SP4Q02446 784 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms