RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GNA14O95837 355 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 SPA17Q15506 151 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 ECM1Q16610 540 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 ZCWPW2Q504Y3 356 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 FAM26FQ5R3K3 315 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 HAUS3Q68CZ6 603 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 CEP63Q96MT8 703 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 PURBQ96QR8 312 aaKnown RBP19.1■□□□□ 0.65
BRCA2-204ENST00000530893 AMNQ9BXJ7 453 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 UBXN6Q9BZV1 441 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 PANK4Q9NVE7 773 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 COL2A1P02458 1487 aaPredicted RBP19.1■□□□□ 0.65
BRCA2-204ENST00000530893 ATRNL1Q5VV63 1379 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L15C9J2P7 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L13C9JLJ4 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L11C9JVI0 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L18D6R9N7 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L22D6RA61 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L17D6RBQ6 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L19D6RCP7 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L20D6RJB6 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 FOSP01100 380 aaPredicted RBP19.1■□□□□ 0.65
BRCA2-204ENST00000530893 VAV2P52735 878 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 ICA1Q05084 483 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L24Q0WX57 530 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 KIF5AQ12840 1032 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 USP17L6PQ6QN14 398 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 MSL3Q8N5Y2 521 aaKnown RBP19.1■□□□□ 0.65
BRCA2-204ENST00000530893 CRYGNQ8WXF5 182 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 ZNF622Q969S3 477 aaKnown RBP eCLIP19.1■□□□□ 0.65
BRCA2-204ENST00000530893 GBP3Q9H0R5 595 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 SAR1BQ9Y6B6 198 aa19.1■□□□□ 0.65
BRCA2-204ENST00000530893 PITPNM2Q9BZ72 1349 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 ECE2O60344 883 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 LCA5LO95447 670 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 RBM5P52756 815 aaKnown RBP eCLIP19.09■□□□□ 0.65
BRCA2-204ENST00000530893 TCP10Q12799 353 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 LONRF2Q1L5Z9 754 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 FUT8Q9BYC5 575 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 TRIM10Q9UDY6 481 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 COL4A3BPQ9Y5P4 624 aa19.09■□□□□ 0.65
BRCA2-204ENST00000530893 MEIS2O14770 477 aa19.08■□□□□ 0.65
BRCA2-204ENST00000530893 ENTPD3O75355 529 aa19.08■□□□□ 0.65
BRCA2-204ENST00000530893 PLA2G4BP0C869 781 aa19.08■□□□□ 0.65
BRCA2-204ENST00000530893 Q4G0T1 1027 aa19.08■□□□□ 0.65
BRCA2-204ENST00000530893 NUCKS1Q9H1E3 243 aaKnown RBP19.08■□□□□ 0.65
BRCA2-204ENST00000530893 KIAA1024Q9UPX6 916 aa19.08■□□□□ 0.65
BRCA2-204ENST00000530893 F5H6K3 240 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 H0YIN7 160 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 USO1O60763 962 aaKnown RBP19.08■□□□□ 0.64
BRCA2-204ENST00000530893 MARSP56192 900 aaKnown RBP19.08■□□□□ 0.64
BRCA2-204ENST00000530893 CKAP4Q07065 602 aaKnown RBP19.08■□□□□ 0.64
BRCA2-204ENST00000530893 KLRC3Q07444 240 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 SH3BP5LQ7L8J4 393 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 SIAH1Q8IUQ4 282 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 TXLNBQ8N3L3 684 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 KCNQ5Q9NR82 932 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 SCN9AQ15858 1988 aa19.08■□□□□ 0.64
BRCA2-204ENST00000530893 SASH3O75995 380 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 MMP14P50281 582 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 ARHGAP4P98171 946 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 ABCB5Q2M3G0 1257 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 PPP4R3CPQ6ZMV5 832 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 C2CD5Q86YS7 1000 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 KCTD17Q8N5Z5 321 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 ERMNQ8TAM6 284 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 MMRN2Q9H8L6 949 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 FRMD3A2A2Y4 597 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 MAP2K7O14733 419 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 RAD21O60216 631 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 CACNB3P54284 484 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 TRAF1Q13077 416 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 WDR93Q6P2C0 686 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 FBXO11Q86XK2 927 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 TRIM58Q8NG06 486 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 FAM207AQ9NSI2 230 aaPredicted RBP19.07■□□□□ 0.64
BRCA2-204ENST00000530893 PCDHA2Q9Y5H9 948 aa19.07■□□□□ 0.64
BRCA2-204ENST00000530893 E9PMD0 336 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 NKRFO15226 690 aaKnown RBP eCLIP19.06■□□□□ 0.64
BRCA2-204ENST00000530893 MCM3P25205 808 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 LRRC41Q15345 812 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 BEND6Q5SZJ8 279 aaPredicted RBP19.06■□□□□ 0.64
BRCA2-204ENST00000530893 BTNL9Q6UXG8 535 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 NEK11Q8NG66 645 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 ETNPPLQ8TBG4 499 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 SECISBP2LQ93073 1101 aaKnown RBP19.06■□□□□ 0.64
BRCA2-204ENST00000530893 FAM20AQ96MK3 541 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 LACRTQ9GZZ8 138 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 ARHGAP20Q9P2F6 1191 aa19.06■□□□□ 0.64
BRCA2-204ENST00000530893 TRAF5O00463 557 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 ATP1A1P05023 1023 aaKnown RBP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SSBP05455 408 aaKnown RBP eCLIP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 CYP11B2P19099 503 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SREBF1P36956 1147 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 ZNF771Q7L3S4 317 aaPredicted RBP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 GPBP1Q86WP2 473 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SYN2Q92777 582 aaPredicted RBP19.05■□□□□ 0.64
BRCA2-204ENST00000530893 PNKPQ96T60 521 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 FAM184BQ9ULE4 1060 aa19.05■□□□□ 0.64
BRCA2-204ENST00000530893 SSU72P8A0A1W2PR75 194 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms