RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 G2E3Q7L622 706 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 SATL1Q86VE3 508 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 PAF1Q8N7H5 531 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 APPL2Q8NEU8 664 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 PIP4K2CQ8TBX8 421 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 GPATCH3Q96I76 525 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 RPGRIP1Q96KN7 1286 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 TBATAQ96M53 351 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 SH3GL1Q99961 368 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 GOLPH3Q9H4A6 298 aa9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 XAB2Q9HCS7 855 aaKnown RBP9.63□□□□□ -0.87
CAPRIN1-209ENST00000530820 F8W031 263 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 SEC24DO94855 1032 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 APOEP02649 317 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 GNAI2P04899 355 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 ADCY8P40145 1251 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 CRY1Q16526 586 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 CREB3L3Q68CJ9 461 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 KDM7AQ6ZMT4 941 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 FMR1NBQ8N0W7 255 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 PHACTR3Q96KR7 559 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 ZSCAN31Q96LW9 406 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 HEPHQ9BQS7 1158 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 DNAI2Q9GZS0 605 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 TAF1DQ9H5J8 278 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 SPTLC2O15270 562 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 ZFYP08048 801 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 TROVE2P10155 538 aaKnown RBP eCLIP9.62□□□□□ -0.873e-6■■□□□ 11.8
CAPRIN1-209ENST00000530820 CHN1P15882 459 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 EPHB2P29323 1055 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 PABPC4Q13310 644 aaKnown RBP eCLIP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 SLC4A8Q2Y0W8 1093 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 ANO4Q32M45 955 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 HGSNATQ68CP4 663 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 PAOXQ6QHF9 649 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 USP37Q86T82 979 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 GALNT4Q8N4A0 578 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 CCDC110Q8TBZ0 833 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 SCG3Q8WXD2 468 aaKnown RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 LENG1Q96BZ8 264 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 UBAC1Q9BSL1 405 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 NMRK1Q9NWW6 199 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 NPTXRO95502 500 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 C16orf72Q14CZ0 275 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 CNKSR1Q969H4 720 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 CHMP6Q96FZ7 201 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 AIFM3Q96NN9 605 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 TUBGCP5Q96RT8 1024 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 NACAP1Q9BZK3 213 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 LSG1Q9H089 658 aaKnown RBP9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 BOLA2Q9H3K6 86 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 CARD8Q9Y2G2 431 aa9.62□□□□□ -0.87
CAPRIN1-209ENST00000530820 PTPDC1A2A3K4 754 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ADCY6O43306 1168 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 TRPA1O75762 1119 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 NKX2-5P52952 324 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 MRPS9P82933 396 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 SKOR1P84550 965 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 PPP2R2DQ66LE6 453 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 YTHDF3Q7Z739 585 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 CABP7Q86V35 215 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 HEATR4Q86WZ0 1026 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 LRRC8CQ8TDW0 803 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 AENQ8WTP8 325 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 API5Q9BZZ5 524 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 TRNAU1APQ9NX07 287 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 NOX1Q9Y5S8 564 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ATP10AO60312 1499 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 GPR75-ASB3A0A0A6YYF3 556 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 TRAPPC3O43617 180 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ZC3H11AO75152 810 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ARID5AQ03989 594 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ZYXQ15942 572 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 HP1BP3Q5SSJ5 553 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 OR52E8Q6IFG1 317 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 MYOCDQ8IZQ8 938 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 PSD4Q8NDX1 1056 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 SPATA4Q8NEY3 305 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ZFAND2BQ8WV99 257 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 IFT122Q9HBG6 1241 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ANLNQ9NQW6 1124 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 SACM1LQ9NTJ5 587 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ASB3Q9Y575 518 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 RCCD1A6NED2 376 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 GOLGA8JA6NMD2 632 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 NOTOA8MTQ0 251 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 GOLGA8TH3BQL2 631 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ATP9BO43861 1147 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 ACSL4O60488 711 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 GOLGA8HP0CJ92 632 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 EPHB4P54760 987 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 EDRF1Q3B7T1 1238 aa9.61□□□□□ -0.87
CAPRIN1-209ENST00000530820 CCDC25Q86WR0 208 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms