RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 LRFN2Q9ULH4 789 aa9.22□□□□□ -0.93
CTNND1-227ENST00000530748 PNMA6FA0A0J9YX94 578 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 NPR1P16066 1061 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 MECOMQ03112 1051 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 MESDQ14696 234 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 CCDC93Q567U6 631 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 NLRP7Q8WX94 980 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 MED4Q9NPJ6 270 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 BSDC1Q9NW68 430 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-227ENST00000530748 TRPM1Q7Z4N2 1603 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 TYW5A2RUC4 315 aaKnown RBP9.21□□□□□ -0.93
CTNND1-227ENST00000530748 ARHGAP42A6NI28 874 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 KRT1P04264 644 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 NT5C2P49902 561 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 PKP1Q13835 747 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 CAPN12Q6ZSI9 719 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 LRRC8CQ8TDW0 803 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 SLC7A3Q8WY07 619 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 ZNF653Q96CK0 615 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 HAUS8Q9BT25 410 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 EFCC1Q9HA90 598 aa9.21□□□□□ -0.93
CTNND1-227ENST00000530748 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-227ENST00000530748 PRKAB2O43741 272 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 CDC37Q16543 378 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-227ENST00000530748 MUM1Q2TAK8 710 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 CCDC170Q8IYT3 715 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 BBS5Q8N3I7 341 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 ANTXR1Q9H6X2 564 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 KIF3CO14782 793 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 GSTA1P08263 222 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 GSTA2P09210 222 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 SURF1Q15526 300 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 CCHCR1Q8TD31 782 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 PBKQ96KB5 322 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 SRPRBQ9Y5M8 271 aaKnown RBP9.21□□□□□ -0.94
CTNND1-227ENST00000530748 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 SERPING1P05155 500 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 RXRBP28702 533 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 YWHAGP61981 247 aaKnown RBP eCLIP9.21□□□□□ -0.94
CTNND1-227ENST00000530748 EHHADHQ08426 723 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 PI4KBQ9UBF8 816 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 MAD1L1Q9Y6D9 718 aa9.21□□□□□ -0.94
CTNND1-227ENST00000530748 GLI2P10070 1586 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 SPHKAPQ2M3C7 1700 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PLA2R1Q13018 1463 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 VPS41P49754 854 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 GUCY2DQ02846 1103 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 CCDC38Q502W7 563 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 C11orf57Q6ZUT1 292 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PPP1R12CQ9BZL4 782 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 SLC38A10Q9HBR0 1119 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PIH1D3Q9NQM4 214 aaKnown RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 GCNT4Q9P109 453 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 ZNF853P0CG23 659 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 ZSCAN20P17040 1043 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 LRRC41Q15345 812 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 KRT27Q7Z3Y8 459 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PAGE5Q96GU1 130 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PCIF1Q9H4Z3 704 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 Q9H521 79 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 MYO1FO00160 1098 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 INHBAP08476 426 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 IL9RQ01113 521 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 CACNB1Q02641 598 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 RTKN2Q8IZC4 609 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 SLC35F6Q8N357 371 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 COA7Q96BR5 231 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 SF3A3Q12874 501 aaKnown RBP eCLIP9.2□□□□□ -0.942e-7■■■□□ 14.9
CTNND1-227ENST00000530748 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 UBE2SQ16763 222 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 ZBTB33Q86T24 672 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 ABI1Q8IZP0 508 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 NCAPGQ9BPX3 1015 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 UBE2TQ9NPD8 197 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 SLC12A6Q9UHW9 1150 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 CLTCL1P53675 1640 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 TTC36A6NLP5 189 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 MEIS1O00470 390 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 MCF2LO15068 1137 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 CLIC2O15247 247 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 ECEL1O95672 775 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PLA2G4BP0C869 781 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 IREB2P48200 963 aaKnown RBP9.2□□□□□ -0.94
CTNND1-227ENST00000530748 C2orf54Q08AI8 447 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
CTNND1-227ENST00000530748 COA1Q9GZY4 146 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms