RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
PPFIA1-216ENST00000530746 SPATA31C2B4DYI2 1134 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 TLR3O15455 904 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 SP2Q02086 613 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 CELF3Q5SZQ8 465 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 MYSM1Q5VVJ2 828 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 PPTC7Q8NI37 304 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 CCDC12Q8WUD4 166 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 UBE2OQ9C0C9 1292 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 EHMT1Q9H9B1 1298 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 LAMA3Q16787 3333 aa17.13■□□□□ 0.33
PPFIA1-216ENST00000530746 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 CPLX1O14810 134 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 FIBPO43427 364 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 GGPS1O95749 300 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 CD4P01730 458 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 STK3Q13188 491 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 DGKDQ16760 1214 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 NLRX1Q86UT6 975 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 ZMYND12Q9H0C1 365 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 TBX21Q9UL17 535 aa17.12■□□□□ 0.33
PPFIA1-216ENST00000530746 RAG1P15918 1043 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 ITGB8P26012 769 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 AK2P54819 239 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 AP3B2Q13367 1082 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 CPLX2Q6PUV4 134 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 TRIM22Q8IYM9 498 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 BADQ92934 168 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 SPATA33Q96N06 139 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 ANO3Q9BYT9 981 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 MLXIPQ9HAP2 919 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 TPCN1Q9ULQ1 816 aa17.11■□□□□ 0.33
PPFIA1-216ENST00000530746 SORBS3O60504 671 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 B4GALT4O60513 344 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 ITGB5P18084 799 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 SSRP1Q08945 709 aaKnown RBP17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 NEDD9Q14511 834 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 NFRKBQ6P4R8 1299 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 CDHR1Q96JP9 859 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 TMEM260Q9NX78 707 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 UBIAD1Q9Y5Z9 338 aa17.1■□□□□ 0.33
PPFIA1-216ENST00000530746 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 TIMP1P01033 207 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 GNA11P29992 359 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 NEK4P51957 841 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 SCRN1Q12765 414 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 METTL7BQ6UX53 244 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 TDHQ8IZJ6 230 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 KAT2BQ92831 832 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 PGBD1Q96JS3 809 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 TRPV6Q9H1D0 765 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 SH3GLB2Q9NR46 395 aa17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
PPFIA1-216ENST00000530746 MAFGO15525 162 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 PFKFB2O60825 505 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 DEXIO95424 95 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 SREBF1P36956 1147 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 MTMR1Q13613 665 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 FAM47CQ5HY64 1035 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 CYFIP1Q7L576 1253 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 REXO1Q8N1G1 1221 aaKnown RBP17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 GIMAP8Q8ND71 665 aaPredicted RBP17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 JADE2Q9NQC1 790 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 VPS54Q9P1Q0 977 aa17.08■□□□□ 0.32
PPFIA1-216ENST00000530746 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 CDKL5O76039 1030 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 F2P00734 622 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 SUPT20HL2P0C7V6 817 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 ZNF286BP0CG31 522 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 CHMP4BP1P59074 171 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 MFSD5Q6N075 450 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 BICD2Q8TD16 824 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 MXRA8Q9BRK3 442 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 TRIP12Q14669 1992 aaPredicted RBP17.07■□□□□ 0.32
PPFIA1-216ENST00000530746 HAS3O00219 553 aa17.06■□□□□ 0.32
PPFIA1-216ENST00000530746 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
PPFIA1-216ENST00000530746 ATP9AO75110 1047 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms