RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 KCNJ14Q9UNX9 436 aa17.84■□□□□ 0.45
CTSB-219ENST00000530640 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
CTSB-219ENST00000530640 ARVCFO00192 962 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 FOSL2P15408 326 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 CALML3P27482 149 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.45
CTSB-219ENST00000530640 RESTQ13127 1097 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 RNF207Q6ZRF8 634 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 FBXO16Q8IX29 292 aaPredicted RBP17.83■□□□□ 0.45
CTSB-219ENST00000530640 TMEM199Q8N511 208 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 DAGLBQ8NCG7 672 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 CCDC12Q8WUD4 166 aaPredicted RBP17.83■□□□□ 0.45
CTSB-219ENST00000530640 CLEC4DQ8WXI8 215 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 PURBQ96QR8 312 aaKnown RBP17.83■□□□□ 0.45
CTSB-219ENST00000530640 AMNQ9BXJ7 453 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 ZMYND12Q9H0C1 365 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 TBX21Q9UL17 535 aa17.83■□□□□ 0.45
CTSB-219ENST00000530640 MYADML2A6NDP7 307 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 F13A1P00488 732 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 ASGR1P07306 291 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 NAPAP54920 295 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 GNASQ5JWF2 1037 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 EEPD1Q7L9B9 569 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 VTI1AQ96AJ9 217 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 ABCB11O95342 1321 aa17.82■□□□□ 0.44
CTSB-219ENST00000530640 LOC102724159A0A0B4J2E5 919 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.81■□□□□ 0.44
CTSB-219ENST00000530640 KIF28PB7ZC32 967 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 M0R2N6 131 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 ZEB2O60315 1214 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 RPS6P62753 249 aaKnown RBP17.81■□□□□ 0.44
CTSB-219ENST00000530640 TRAF1Q13077 416 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 PWP2Q15269 919 aaKnown RBP17.81■□□□□ 0.44
CTSB-219ENST00000530640 GALNT17Q6IS24 598 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 DIS3L2Q8IYB7 885 aaKnown RBP17.81■□□□□ 0.44
CTSB-219ENST00000530640 MYLIPQ8WY64 445 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 TNFRSF25Q93038 417 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 MPHOSPH6Q99547 160 aaKnown RBP17.81■□□□□ 0.44
CTSB-219ENST00000530640 VTA1Q9NP79 307 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 Q9Y3F1 56 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 PCDHA1Q9Y5I3 950 aa17.81■□□□□ 0.44
CTSB-219ENST00000530640 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.44
CTSB-219ENST00000530640 EPHB4P54760 987 aa17.8■□□□□ 0.44
CTSB-219ENST00000530640 IRX5P78411 483 aaPredicted RBP17.8■□□□□ 0.44
CTSB-219ENST00000530640 PSRC1Q6PGN9 363 aaPredicted RBP17.8■□□□□ 0.44
CTSB-219ENST00000530640 TLK2Q86UE8 772 aa17.8■□□□□ 0.44
CTSB-219ENST00000530640 MORC4Q8TE76 937 aa17.8■□□□□ 0.44
CTSB-219ENST00000530640 MTIF3Q9H2K0 278 aaKnown RBP17.8■□□□□ 0.44
CTSB-219ENST00000530640 FOXP1Q9H334 677 aaPredicted RBP17.8■□□□□ 0.44
CTSB-219ENST00000530640 PCDHA4Q9UN74 947 aa17.8■□□□□ 0.44
CTSB-219ENST00000530640 OPLAHO14841 1288 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 ADAMTS3O15072 1205 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 DNAJB2P25686 324 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 KRT2P35908 639 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 NLRP5P59047 1200 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTSB-219ENST00000530640 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 TEX2Q8IWB9 1127 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 ZSCAN16Q9H4T2 348 aaPredicted RBP17.79■□□□□ 0.44
CTSB-219ENST00000530640 ZNF576Q9H609 170 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 BTBD18B2RXH4 712 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 SMPD1P17405 629 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 RASIP1Q5U651 963 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
CTSB-219ENST00000530640 TAPT1Q6NXT6 567 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 FAM126BQ8IXS8 530 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 DNERQ8NFT8 737 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
CTSB-219ENST00000530640 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
CTSB-219ENST00000530640 TIFAQ96CG3 184 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 AP5M1Q9H0R1 490 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 BRMS1Q9HCU9 246 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 RIC8AQ9NPQ8 531 aa17.79■□□□□ 0.44
CTSB-219ENST00000530640 GNEQ9Y223 722 aaKnown RBP17.79■□□□□ 0.44
CTSB-219ENST00000530640 SMCO2A6NFE2 343 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 GNA11P29992 359 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 CLK2P49760 499 aaKnown RBP17.78■□□□□ 0.44
CTSB-219ENST00000530640 ADCY7P51828 1080 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 BEX3Q00994 111 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 GHRHRQ02643 423 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 PDE4DQ08499 809 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 NR5A1Q13285 461 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 MCTP1Q6DN14 999 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 IQSEC1Q6DN90 963 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 MCF2L2Q86YR7 1114 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 NOSTRINQ8IVI9 506 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 BLIDQ8IZY5 108 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 SLC43A3Q8NBI5 491 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.78■□□□□ 0.441e-7■■■■■ 39.4
CTSB-219ENST00000530640 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
CTSB-219ENST00000530640 MRPL11Q9Y3B7 192 aaKnown RBP17.78■□□□□ 0.44
CTSB-219ENST00000530640 B4DLN1 442 aa17.77■□□□□ 0.43
CTSB-219ENST00000530640 CTAGE5O15320 804 aa17.77■□□□□ 0.43
CTSB-219ENST00000530640 CD4P01730 458 aa17.77■□□□□ 0.43
CTSB-219ENST00000530640 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms