RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 KIF11P52732 1056 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 MAGOHP61326 146 aaKnown RBP8.27□□□□□ -1.09
CTNND1-223ENST00000529986 CCDC117Q8IWD4 279 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-223ENST00000529986 ARMC2Q8NEN0 867 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.27□□□□□ -1.09
CTNND1-223ENST00000529986 C8orf37Q96NL8 207 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 GGT7Q9UJ14 662 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 SPHKAPQ2M3C7 1700 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 KAT6BQ8WYB5 2073 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 CLIC2O15247 247 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 PDE8AO60658 829 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 MYL7Q01449 175 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 TMTC4Q5T4D3 741 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 C16orf87Q6PH81 154 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 AIFM3Q96NN9 605 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 HAUS8Q9BT25 410 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 POLD4Q9HCU8 107 aa8.27□□□□□ -1.09
CTNND1-223ENST00000529986 THRAP3Q9Y2W1 955 aaKnown RBP8.27□□□□□ -1.09
CTNND1-223ENST00000529986 GYG2O15488 501 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 LMNB1P20700 586 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 MAPK4P31152 587 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 YARSP54577 528 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 CCHCR1Q8TD31 782 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 NSMCE1Q8WV22 266 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 BEGAINQ9BUH8 593 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 HDAC6Q9UBN7 1215 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 DDX25Q9UHL0 483 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 KIAA1024Q9UPX6 916 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 KCNQ3O43525 872 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 SPAG7O75391 227 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 LONP1P36776 959 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 GARSP41250 739 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 BASP1P80723 227 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 KIF23Q02241 960 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 EMBQ6PCB8 327 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 NLRP14Q86W24 1093 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 SYT2Q8N9I0 419 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 TTLL11Q8NHH1 800 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 PANX2Q96RD6 677 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 TRIM56Q9BRZ2 755 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 TRAIPQ9BWF2 469 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 DRC3Q9H069 523 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 KLC4Q9NSK0 619 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 SNX24Q9Y343 169 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 MAP3K4Q9Y6R4 1608 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 YEATS2Q9ULM3 1422 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 NOP56O00567 594 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 MFAP3LO75121 409 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 GRM1Q13255 1194 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ZNF658Q5TYW1 1059 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ARMCX5Q6P1M9 558 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 SRLQ86TD4 932 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ENOX1Q8TC92 643 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 CDKL2Q92772 493 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 CFAP36Q96G28 342 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 CARD10Q9BWT7 1032 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 TRPC6Q9Y210 931 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 NEURL1BA8MQ27 555 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 HNRNPCP07910 306 aaKnown RBP eCLIP8.26□□□□□ -1.099e-7■■■■□ 20.8
CTNND1-223ENST00000529986 RESTQ13127 1097 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ART3Q13508 389 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 LRRC24Q50LG9 513 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 PGBD1Q96JS3 809 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 MMS19Q96T76 1030 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 EYA3Q99504 573 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ANO3Q9BYT9 981 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 GLT8D2Q9H1C3 349 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ZC4H2Q9NQZ6 224 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 PACSIN2Q9UNF0 486 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 CASP1P29466 404 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 RAD23BP54727 409 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 LRRC14Q15048 493 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 KRT31Q15323 416 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 C10orf76Q5T2E6 689 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 TRMT2AQ8IZ69 625 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 CXorf56Q9H5V9 222 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 AZI2Q9H6S1 392 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 ECT2Q9H8V3 914 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 PSTPIP2Q9H939 334 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 STK32BQ9NY57 414 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 PPARGC1AQ9UBK2 798 aaKnown RBP8.26□□□□□ -1.09
CTNND1-223ENST00000529986 INPP5FQ9Y2H2 1132 aa8.26□□□□□ -1.09
CTNND1-223ENST00000529986 GMNCA6NCL1 334 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 FGGP02679 453 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 LIG4P49917 911 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 HSPA2P54652 639 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 GUCY1A3Q02108 690 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 PABPC4Q13310 644 aaKnown RBP eCLIP8.25□□□□□ -1.09
CTNND1-223ENST00000529986 MAN2A1Q16706 1144 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 C6orf118Q5T5N4 469 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 RGS9BPQ6ZS82 235 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 RETREG2Q8NC44 543 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 TTC17Q96AE7 1141 aa8.25□□□□□ -1.09
CTNND1-223ENST00000529986 PBKQ96KB5 322 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms