RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 VTI1AQ96AJ9 217 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 POLR3EQ9NVU0 708 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 LIMCH1Q9UPQ0 1083 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 ATP11BQ9Y2G3 1177 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 MYH7BA7E2Y1 1941 aa14.51□□□□□ -0.09
CCDC90B-216ENST00000529856 A0A0U1RQG5 324 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 FIBPO43427 364 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 KPNA6O60684 536 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 ITGB5P18084 799 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 CDK7P50613 346 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 TLE2Q04725 743 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 CELF3Q5SZQ8 465 aaKnown RBP14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 MYSM1Q5VVJ2 828 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 JAKMIP3Q5VZ66 844 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 MCTP2Q6DN12 878 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 DHX37Q8IY37 1157 aaKnown RBP14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 FAM177A1Q8N128 213 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 BICD2Q8TD16 824 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 PGBD1Q96JS3 809 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 ANO3Q9BYT9 981 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 UBIAD1Q9Y5Z9 338 aa14.5□□□□□ -0.09
CCDC90B-216ENST00000529856 GRIN2DO15399 1336 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 STK36Q9NRP7 1315 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 ARVCFO00192 962 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 GGPS1O95749 300 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 MYL3P08590 195 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 UBA1P22314 1058 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 SREBF1P36956 1147 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 NLRP5P59047 1200 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 PURAQ00577 322 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 RABEP1Q15276 862 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 ANKRD33Q7Z3H0 272 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 REXO1Q8N1G1 1221 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 SLC43A3Q8NBI5 491 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 GPRASP2Q96D09 838 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 TBC1D32Q96NH3 1257 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 TOX2Q96NM4 488 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 AIFM3Q96NN9 605 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 SENP7Q9BQF6 1050 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 MTG1Q9BT17 334 aaPredicted RBP14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 SEZ6LQ9BYH1 1024 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 BACH2Q9BYV9 841 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 BCAS3Q9H6U6 928 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 JADE2Q9NQC1 790 aa14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 ZMYND8Q9ULU4 1186 aaPredicted RBP14.49□□□□□ -0.09
CCDC90B-216ENST00000529856 DTNBO60941 627 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 MMP3P08254 477 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 SYN1P17600 705 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 PSMC6P62333 389 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 ITGA7Q13683 1181 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 NEDD9Q14511 834 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 NSUN7Q8NE18 718 aaKnown RBP14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 IL27Q8NEV9 243 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 PPTC7Q8NI37 304 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 CRYGNQ8WXF5 182 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 CDHR1Q96JP9 859 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 ZSCAN31Q96LW9 406 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 MXRA8Q9BRK3 442 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 MLXIPQ9HAP2 919 aa14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 ORC3Q9UBD5 711 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-216ENST00000529856 MROH7Q68CQ1 1323 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 DCDC2CA8MYV0 355 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 MAFGO15525 162 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 SORBS3O60504 671 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 PQBP1O60828 265 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 ATP9AO75110 1047 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 PPFIA4O75335 1185 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 CYP3A4P08684 503 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 FDPSP14324 419 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 ARHGAP4P98171 946 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 DGKDQ16760 1214 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 HSDL1Q3SXM5 330 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 GALNT17Q6IS24 598 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 CYP2W1Q8TAV3 490 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 RASGRP4Q8TDF6 673 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 WASF1Q92558 559 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 SPATA33Q96N06 139 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 PCDHA4Q9UN74 947 aa14.47□□□□□ -0.09
CCDC90B-216ENST00000529856 CEP290O15078 2479 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 M0R2N6 131 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 MEIS1O00470 390 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 HOXD8P13378 290 aaPredicted RBP14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 XBP1P17861 261 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 FAAP100Q0VG06 881 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 MTMR1Q13613 665 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 NPY5RQ15761 445 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 CEP55Q53EZ4 464 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 METTL7BQ6UX53 244 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 CYFIP1Q7L576 1253 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 BLIDQ8IZY5 108 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 DAGLBQ8NCG7 672 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 PHF20Q9BVI0 1012 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 PDLIM7Q9NR12 457 aa14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 SH2B1Q9NRF2 756 aaPredicted RBP14.46□□□□□ -0.09
CCDC90B-216ENST00000529856 SCN10AQ9Y5Y9 1956 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 TRIM43BA6NCK2 446 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 ST18O60284 1047 aa14.45□□□□□ -0.1
CCDC90B-216ENST00000529856 JAK2O60674 1132 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms