RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 MAD2L2Q9UI95 211 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 MTUS1Q9ULD2 1270 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 COG5Q9UP83 839 aa14.07□□□□□ -0.16
USH1C-208ENST00000529563 ABHD14A-ACY1A0A1B0GW23 586 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 PPFIA4O75335 1185 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 COL9A1P20849 921 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 THPOP40225 353 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 PGM5Q15124 567 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 CELF3Q5SZQ8 465 aaKnown RBP14.06□□□□□ -0.16
USH1C-208ENST00000529563 KRT40Q6A162 431 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 CYB5R4Q7L1T6 521 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 TMCO2Q7Z6W1 182 aaPredicted RBP14.06□□□□□ -0.16
USH1C-208ENST00000529563 CATIPQ7Z7H3 387 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 SAMD3Q8N6K7 520 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 DHX38Q92620 1227 aaKnown RBP14.06□□□□□ -0.16
USH1C-208ENST00000529563 PIGSQ96S52 555 aa14.06□□□□□ -0.16
USH1C-208ENST00000529563 KIAA1217Q5T5P2 1943 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 EPOPA6NHQ4 379 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 NBNO60934 754 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 F2P00734 622 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 KCNQ1P51787 676 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 DEFB103AP81534 67 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 GRB10Q13322 594 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 GRM4Q14833 912 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 ZNF618Q5T7W0 954 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 STOX1Q6ZVD7 989 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 VSIG10LQ86VR7 867 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 NCOA7Q8NI08 942 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 CUL5Q93034 780 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 HLA-CQ95604 372 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 ZFP91Q96JP5 570 aaPredicted RBP14.05□□□□□ -0.16
USH1C-208ENST00000529563 NECAB3Q96P71 396 aaPredicted RBP14.05□□□□□ -0.16
USH1C-208ENST00000529563 RAD9AQ99638 391 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 EMSYQ7Z589 1322 aa14.05□□□□□ -0.16
USH1C-208ENST00000529563 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
USH1C-208ENST00000529563 PNMA6FA0A0J9YX94 578 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 LCHNA4D1U4 455 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 PALM3A6NDB9 673 aaPredicted RBP14.04□□□□□ -0.16
USH1C-208ENST00000529563 RSPH10B2B2RC85 870 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 PPP1R11O60927 126 aaPredicted RBP14.04□□□□□ -0.16
USH1C-208ENST00000529563 AMHP03971 560 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 RSPH10BP0C881 870 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 TGFB3P10600 412 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
USH1C-208ENST00000529563 UBA1P22314 1058 aaKnown RBP14.04□□□□□ -0.16
USH1C-208ENST00000529563 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
USH1C-208ENST00000529563 SEC23AQ15436 765 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 HSDL1Q3SXM5 330 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 MYSM1Q5VVJ2 828 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 MYOCDQ8IZQ8 938 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 SMARCC2Q8TAQ2 1214 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 GDPD5Q8WTR4 605 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 ATP6V0A1Q93050 837 aa14.04□□□□□ -0.16
USH1C-208ENST00000529563 TGS1Q96RS0 853 aaKnown RBP14.04□□□□□ -0.16
USH1C-208ENST00000529563 OPLAHO14841 1288 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 LGR5O75473 907 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 ARHGEF15O94989 841 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 GJB5O95377 273 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 CXCL10P02778 98 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 GNAT1P11488 350 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 BMP1P13497 986 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 RBL2Q08999 1139 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 MTMR8Q96EF0 704 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
USH1C-208ENST00000529563 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
USH1C-208ENST00000529563 CHD7Q9P2D1 2997 aa14.02□□□□□ -0.16
USH1C-208ENST00000529563 PRRC2BQ5JSZ5 2229 aaKnown RBP14.02□□□□□ -0.16
USH1C-208ENST00000529563 MYH7BA7E2Y1 1941 aa14.02□□□□□ -0.16
USH1C-208ENST00000529563 H3BRB1 525 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 HAS3O00219 553 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 CYP21A2P08686 494 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 SP4Q02446 784 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 NEDD9Q14511 834 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 UTP14CQ5TAP6 766 aaKnown RBP14.02□□□□□ -0.17
USH1C-208ENST00000529563 NFXL1Q6ZNB6 911 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.17
USH1C-208ENST00000529563 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.17
USH1C-208ENST00000529563 C1QTNF1Q9BXJ1 281 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 IL25Q9H293 177 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
USH1C-208ENST00000529563 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 RTEL1Q9NZ71 1219 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.17
USH1C-208ENST00000529563 TET1Q8NFU7 2136 aa14.02□□□□□ -0.17
USH1C-208ENST00000529563 E7EWF7 191 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 STAM2O75886 525 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 RGS20O76081 388 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 LGALS2P05162 132 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 CTSHP09668 335 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 SMIM10L2AP0DMW4 78 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 SMIM10L2BP0DMW5 78 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 GSPT1P15170 499 aaKnown RBP14.01□□□□□ -0.17
USH1C-208ENST00000529563 KIF5BP33176 963 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 SP2Q02086 613 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 GHRHRQ02643 423 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 PTH1RQ03431 593 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 CYFIP1Q7L576 1253 aa14.01□□□□□ -0.17
USH1C-208ENST00000529563 SPRED2Q7Z698 418 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms