RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 CHURC1Q8WUH1 139 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 CTAGE1Q96RT6 745 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 AP5M1Q9H0R1 490 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 MTIF3Q9H2K0 278 aaKnown RBP7.11□□□□□ -1.27
NUP98-215ENST00000529063 RANBP17Q9H2T7 1088 aaKnown RBP7.11□□□□□ -1.27
NUP98-215ENST00000529063 DCTPP1Q9H773 170 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 VTA1Q9NP79 307 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 Q9Y3F1 56 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 MTCH2Q9Y6C9 303 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 SLC4A7Q9Y6M7 1214 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 ATG2AQ2TAZ0 1938 aa7.11□□□□□ -1.27
NUP98-215ENST00000529063 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 ERC2O15083 957 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 APPP05067 770 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 ICAM1P05362 532 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 POU3F3P20264 500 aaPredicted RBP7.1□□□□□ -1.27
NUP98-215ENST00000529063 EDNRBP24530 442 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 SLC16A2P36021 539 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 PDE4BQ07343 736 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 IKQ13123 557 aaPredicted RBP7.1□□□□□ -1.27
NUP98-215ENST00000529063 BAATQ14032 418 aaPredicted RBP7.1□□□□□ -1.27
NUP98-215ENST00000529063 PUS10Q3MIT2 529 aaKnown RBP7.1□□□□□ -1.27
NUP98-215ENST00000529063 VPS53Q5VIR6 699 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 BTNL9Q6UXG8 535 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 KIAA1211Q6ZU35 1233 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 DEFB128Q7Z7B8 93 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 LAPTM4BQ86VI4 370 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 CLEC4DQ8WXI8 215 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 COPS5Q92905 334 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 SEZ6LQ9BYH1 1024 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 NAPBQ9H115 298 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 CERS4Q9HA82 394 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 ZNF287Q9HBT7 754 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 CCPG1Q9ULG6 757 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 ISY1Q9ULR0 285 aaKnown RBP7.1□□□□□ -1.27
NUP98-215ENST00000529063 STX8Q9UNK0 236 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 SLC27A5Q9Y2P5 690 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 BRWD1Q9NSI6 2320 aa7.1□□□□□ -1.27
NUP98-215ENST00000529063 MYH6P13533 1939 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 TTC41PQ6P2S7 1318 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 LCHNA4D1U4 455 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 TSPY2A6NKD2 308 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 ZEB2O60315 1214 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 LPXNO60711 386 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 ARIH2O95376 493 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 PFKMP08237 780 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 MYL3P08590 195 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 FGRP09769 529 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 FBXO45P0C2W1 286 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 TAP1Q03518 808 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 GPNMBQ14956 572 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 TCTN1Q2MV58 587 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 NBPF20Q3BBV1 942 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 RPUSD2Q8IZ73 545 aaKnown RBP7.09□□□□□ -1.27
NUP98-215ENST00000529063 OR6J1Q8NGC5 347 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 DCAF4Q8WV16 495 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 GPATCH3Q96I76 525 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 WDR11Q9BZH6 1224 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 NACAP1Q9BZK3 213 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 C11orf16Q9NQ32 467 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 ANAPC4Q9UJX5 808 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 RCAN3Q9UKA8 241 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
NUP98-215ENST00000529063 MICAL3Q7RTP6 2002 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 FRMPD2Q68DX3 1309 aaPredicted RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 LOC102724159A0A0B4J2E5 919 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 ACTN4O43707 911 aaKnown RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 TLL1O43897 1013 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 ORC4O43929 436 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 IQCF3P0C7M6 154 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 CPT1AP50416 773 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 GRB10Q13322 594 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 PWP2Q15269 919 aaKnown RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 CCDC96Q2M329 555 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 TMEM67Q5HYA8 995 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 SYDE2Q5VT97 1194 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 TMCO2Q7Z6W1 182 aaPredicted RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 HERC6Q8IVU3 1022 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 DHX38Q92620 1227 aaKnown RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 SLC9A7Q96T83 725 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 TMEM47Q9BQJ4 181 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 MTG1Q9BT17 334 aaPredicted RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 FSD1Q9BTV5 496 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 CHMP4BQ9H444 224 aaKnown RBP7.08□□□□□ -1.28
NUP98-215ENST00000529063 EPHX3Q9H6B9 360 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 FKBPLQ9UIM3 349 aa7.08□□□□□ -1.28
NUP98-215ENST00000529063 MYH7BA7E2Y1 1941 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 NLRC5Q86WI3 1866 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 RANBP6O60518 1105 aaKnown RBP7.07□□□□□ -1.28
NUP98-215ENST00000529063 SLC3A2P08195 630 aaKnown RBP7.07□□□□□ -1.28
NUP98-215ENST00000529063 SUPT20HL2P0C7V6 817 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 SNHG28P0DPA3 235 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 PDHBP11177 359 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 SKIP12755 728 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 CALML3P27482 149 aa7.07□□□□□ -1.28
NUP98-215ENST00000529063 RFC2P35250 354 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms