RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 DLX2Q07687 328 aaPredicted RBP22.25■■□□□ 1.15
SSRP1-204ENST00000529002 STXBP2Q15833 593 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 DHX37Q8IY37 1157 aaKnown RBP22.25■■□□□ 1.15
SSRP1-204ENST00000529002 TMEM192Q8IY95 271 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 TCP11L1Q9NUJ3 509 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 CTNNA3Q9UI47 895 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 MUTYHQ9UIF7 546 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 TTC41PQ6P2S7 1318 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 TRIOO75962 3097 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 RSPH10B2B2RC85 870 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 RSPH10BP0C881 870 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 PLEKHG4Q58EX7 1191 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 RPAINQ86UA6 219 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 ADHFE1Q8IWW8 467 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 RGS22Q8NE09 1264 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 NSUN6Q8TEA1 469 aaKnown RBP22.24■■□□□ 1.15
SSRP1-204ENST00000529002 YME1L1Q96TA2 773 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 RMDN3Q96TC7 470 aa22.24■■□□□ 1.15
SSRP1-204ENST00000529002 NSUN3Q9H649 340 aaKnown RBP22.24■■□□□ 1.15
SSRP1-204ENST00000529002 CSPG5O95196 566 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 FGAP02671 866 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 COL19A1Q14993 1142 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 CDC37Q16543 378 aaPredicted RBP22.23■■□□□ 1.15
SSRP1-204ENST00000529002 ZKSCAN3Q9BRR0 538 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 KATNAL1Q9BW62 490 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 PRKAG3Q9UGI9 489 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 PNMA2Q9UL42 364 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 MRVI1Q9Y6F6 885 aa22.23■■□□□ 1.15
SSRP1-204ENST00000529002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.22■■□□□ 1.15
SSRP1-204ENST00000529002 FBXO11Q86XK2 927 aa22.22■■□□□ 1.15
SSRP1-204ENST00000529002 PPTC7Q8NI37 304 aa22.22■■□□□ 1.15
SSRP1-204ENST00000529002 EMID1Q96A84 441 aaPredicted RBP22.22■■□□□ 1.15
SSRP1-204ENST00000529002 ZFP91Q96JP5 570 aaPredicted RBP22.22■■□□□ 1.15
SSRP1-204ENST00000529002 KCNH6Q9H252 994 aa22.22■■□□□ 1.15
SSRP1-204ENST00000529002 CTSHP09668 335 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 GTF2F1P35269 517 aaKnown RBP eCLIP22.21■■□□□ 1.15
SSRP1-204ENST00000529002 LAMC2Q13753 1193 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 ALX1Q15699 326 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 ARHGEF16Q5VV41 709 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 SERINC5Q86VE9 423 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 MIER1Q8N108 512 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 PRSS33Q8NF86 280 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 TOP1MTQ969P6 601 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 SAMD11Q96NU1 681 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 EMSYQ7Z589 1322 aa22.21■■□□□ 1.15
SSRP1-204ENST00000529002 KAT6AQ92794 2004 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 RGS20O76081 388 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 NR3C2P08235 984 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 HSDL1Q3SXM5 330 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 IER5LQ5T953 404 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 FAM227BQ96M60 508 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 IWS1Q96ST2 819 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 FAM50BQ9Y247 325 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 ABCB11O95342 1321 aa22.2■■□□□ 1.14
SSRP1-204ENST00000529002 GRM6O15303 877 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 MBTPS2O43462 519 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 HOXD8P13378 290 aaPredicted RBP22.19■■□□□ 1.14
SSRP1-204ENST00000529002 QRICH1Q2TAL8 776 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 MYSM1Q5VVJ2 828 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 RNF135Q8IUD6 432 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 TBC1D10CQ8IV04 446 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 ADGRF4Q8IZF3 695 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 GPKOWQ92917 476 aaPredicted RBP eCLIP22.19■■□□□ 1.14
SSRP1-204ENST00000529002 C16orf70Q9BSU1 422 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 BCAS3Q9H6U6 928 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 PXMP2Q9NR77 195 aa22.19■■□□□ 1.14
SSRP1-204ENST00000529002 ZDBF2Q9HCK1 2354 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 A0A0D9SFI3 127 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 LINC01565O15544 149 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 TREHO43280 583 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 EIF3JO75822 258 aaKnown RBP22.18■■□□□ 1.14
SSRP1-204ENST00000529002 MYCLP12524 364 aaPredicted RBP22.18■■□□□ 1.14
SSRP1-204ENST00000529002 SP2Q02086 613 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 HYAL1Q12794 435 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 SMAD2Q15796 467 aaKnown RBP22.18■■□□□ 1.14
SSRP1-204ENST00000529002 SEPT8Q92599 483 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 ATP6V0A1Q93050 837 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 MFSD14AQ96MC6 490 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 SPATA33Q96N06 139 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 TTC14Q96N46 770 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 IFIH1Q9BYX4 1025 aaKnown RBP22.18■■□□□ 1.14
SSRP1-204ENST00000529002 IGFLR1Q9H665 355 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 VAT1LQ9HCJ6 419 aa22.18■■□□□ 1.14
SSRP1-204ENST00000529002 TBX10O75333 385 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 GGPS1O95749 300 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 CFBP00751 764 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 MX1P20591 662 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 CTNNB1P35222 781 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 CTC1Q2NKJ3 1217 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 GPATCH4Q5T3I0 446 aaKnown RBP22.17■■□□□ 1.14
SSRP1-204ENST00000529002 UPF3BQ9BZI7 483 aaKnown RBP22.17■■□□□ 1.14
SSRP1-204ENST00000529002 RCAN3Q9UKA8 241 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 KMT2EQ8IZD2 1858 aa22.17■■□□□ 1.14
SSRP1-204ENST00000529002 BAZ2BQ9UIF8 2168 aaKnown RBP22.16■■□□□ 1.14
SSRP1-204ENST00000529002 NEDD4P46934 1319 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 KIAA1671Q9BY89 1806 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 C17orf102A2RUQ5 167 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 OPLAHO14841 1288 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 PPFIA4O75335 1185 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 LINC00271P0C7V0 271 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms