RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 LEMD3Q9Y2U8 911 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
CAPN1-214ENST00000528165 ZNF844Q08AG5 666 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 IFFO1Q0D2I5 559 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 SFMBT2Q5VUG0 894 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 EP400NLQ6ZTU2 488 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 FAM212AQ96EL1 285 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 NUCKS1Q9H1E3 243 aaKnown RBP16.13■□□□□ 0.17
CAPN1-214ENST00000528165 TPX2Q9ULW0 747 aaKnown RBP16.13■□□□□ 0.17
CAPN1-214ENST00000528165 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
CAPN1-214ENST00000528165 M0R2N6 131 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 ORC4O43929 436 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 ATP2C2O75185 946 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 SERPING1P05155 500 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 MYBP10242 640 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 IL2RBP14784 551 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 KLRC1P26715 233 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 SLC8A1P32418 973 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 SCTRP47872 440 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 PPP2R2AP63151 447 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 SPRED3Q2MJR0 410 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.13■□□□□ 0.17
CAPN1-214ENST00000528165 PCDHGC5Q9Y5F6 944 aa16.13■□□□□ 0.17
CAPN1-214ENST00000528165 DLEC1Q9Y238 1755 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 H0YGN5 161 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
CAPN1-214ENST00000528165 GKAP1Q5VSY0 366 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-214ENST00000528165 FAM228AQ86W67 206 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 NFS1Q9Y697 457 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-214ENST00000528165 E2F5Q15329 346 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 CPLX4Q7Z7G2 160 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 P3H4Q92791 437 aa16.12■□□□□ 0.17
CAPN1-214ENST00000528165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.12■□□□□ 0.17
CAPN1-214ENST00000528165 MYCNP04198 464 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-214ENST00000528165 UAP1Q16222 522 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-214ENST00000528165 KIAA0753Q2KHM9 967 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 HEATR3Q7Z4Q2 680 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 STAG2Q8N3U4 1231 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 UBLCP1Q8WVY7 318 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-214ENST00000528165 ZNF622Q969S3 477 aaKnown RBP eCLIP16.11■□□□□ 0.17
CAPN1-214ENST00000528165 CALML4Q96GE6 196 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 CEP72Q9P209 647 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 C5orf60A6NFR6 353 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 KCNK3O14649 394 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 BACH1O14867 736 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 LRRC63Q05C16 580 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 LACTB2Q53H82 288 aaPredicted RBP16.11■□□□□ 0.17
CAPN1-214ENST00000528165 GALNT17Q6IS24 598 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 ARHGAP27Q6ZUM4 889 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 SV2BQ7L1I2 683 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 TAX1BP1Q86VP1 789 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 RAPGEF5Q92565 580 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 TBC1D5Q92609 795 aa16.11■□□□□ 0.17
CAPN1-214ENST00000528165 NOVA2Q9UNW9 492 aaKnown RBP16.11■□□□□ 0.17
CAPN1-214ENST00000528165 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 ECHS1P30084 290 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 CLNS1AP54105 237 aaKnown RBP16.1■□□□□ 0.17
CAPN1-214ENST00000528165 EVX2Q03828 476 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 XRCC4Q13426 336 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 MTMR3Q13615 1198 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 RPS6KA1Q15418 735 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 AGBL2Q5U5Z8 902 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 DAGLBQ8NCG7 672 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 SYN2Q92777 582 aaPredicted RBP16.1■□□□□ 0.17
CAPN1-214ENST00000528165 TMEM59LQ9UK28 342 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 CCNT1O60563 726 aaKnown RBP16.1■□□□□ 0.17
CAPN1-214ENST00000528165 TECP42680 631 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 CRYMQ14894 314 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 SLC18A3Q16572 532 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 FAM83BQ5T0W9 1011 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 DDX42Q86XP3 938 aaKnown RBP eCLIP16.1■□□□□ 0.17
CAPN1-214ENST00000528165 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 GUF1Q8N442 669 aaKnown RBP16.1■□□□□ 0.17
CAPN1-214ENST00000528165 TATDN2Q93075 761 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 HVCN1Q96D96 273 aa16.1■□□□□ 0.17
CAPN1-214ENST00000528165 TLR2O60603 784 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 PAEPP09466 180 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 TSG101Q99816 390 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 ATP6V0A4Q9HBG4 840 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 CNOT8Q9UFF9 292 aaKnown RBP16.09■□□□□ 0.17
CAPN1-214ENST00000528165 SWAP70Q9UH65 585 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 FBXL5Q9UKA1 691 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 CES2O00748 559 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 ATF3P18847 181 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 CHRNDQ07001 517 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 KCNMA1Q12791 1236 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 NBPF9Q3BBW0 867 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 DZIP3Q86Y13 1208 aaKnown RBP16.09■□□□□ 0.17
CAPN1-214ENST00000528165 PIGBQ92521 554 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 POLR2FP61218 127 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms