RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 IQCF3P0C7M6 154 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 EIF2AK2P19525 551 aaKnown RBP11.59□□□□□ -0.55
CAPN1-210ENST00000527699 SDSP20132 328 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 PTGISQ16647 500 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 TCTN1Q2MV58 587 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 BRDTQ58F21 947 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-210ENST00000527699 GDF6Q6KF10 455 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-210ENST00000527699 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
CAPN1-210ENST00000527699 ADGRF4Q8IZF3 695 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 SCFD2Q8WU76 684 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 RAD50Q92878 1312 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 ZNF213O14771 459 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 AVPR2P30518 371 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 ZNF200P98182 395 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-210ENST00000527699 HERC6Q8IVU3 1022 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 SYTL5Q8TDW5 730 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-210ENST00000527699 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 KAT14Q9H8E8 782 aa11.58□□□□□ -0.56
CAPN1-210ENST00000527699 ANKRD11Q6UB99 2663 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-210ENST00000527699 A6NJR5 290 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 NKRFO15226 690 aaKnown RBP eCLIP11.57□□□□□ -0.56
CAPN1-210ENST00000527699 CFBP00751 764 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 MMP3P08254 477 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 ZNF286BP0CG31 522 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 MYCLP12524 364 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-210ENST00000527699 EDNRBP24530 442 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 DEFB103AP81534 67 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 QRICH1Q2TAL8 776 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 ARHGEF16Q5VV41 709 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 FRMD5Q7Z6J6 570 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 DNERQ8NFT8 737 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 DHX38Q92620 1227 aaKnown RBP11.57□□□□□ -0.56
CAPN1-210ENST00000527699 ESR2Q92731 530 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 TTC14Q96N46 770 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 MPHOSPH6Q99547 160 aaKnown RBP11.57□□□□□ -0.56
CAPN1-210ENST00000527699 SEZ6LQ9BYH1 1024 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 ALG13Q9NP73 1137 aaKnown RBP11.57□□□□□ -0.56
CAPN1-210ENST00000527699 HDAC6Q9UBN7 1215 aa11.57□□□□□ -0.56
CAPN1-210ENST00000527699 GH1P01241 217 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 IGHDP01880 384 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 PFKMP08237 780 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 NBL1P41271 181 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 KCNJ6P48051 423 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 ARHGAP1Q07960 439 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 BFSP2Q13515 415 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 CLUL1Q15846 466 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 CCDC62Q6P9F0 684 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 FBXO11Q86XK2 927 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 STAG2Q8N3U4 1231 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 PHOSPHO2Q8TCD6 241 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 PIBF1Q8WXW3 757 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 KAT2BQ92831 832 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 RMDN3Q96TC7 470 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 RNF41Q9H4P4 317 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-210ENST00000527699 SUGCTQ9HAC7 445 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 DIAPH3Q9NSV4 1193 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 FASNP49327 2511 aaKnown RBP11.56□□□□□ -0.56
CAPN1-210ENST00000527699 WDR19Q8NEZ3 1342 aa11.56□□□□□ -0.56
CAPN1-210ENST00000527699 SPTBN2O15020 2390 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 B4DLN1 442 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 HOXA13P31271 388 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 PSEN2P49810 448 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 ZXDAP98168 799 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 PUM1Q14671 1186 aaKnown RBP eCLIP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 GPNMBQ14956 572 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 GPATCH4Q5T3I0 446 aaKnown RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 LRRC8DQ7L1W4 858 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 PLEKHM2Q8IWE5 1019 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 NSUN6Q8TEA1 469 aaKnown RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 WNT8BQ93098 351 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 CHAMP1Q96JM3 812 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 ANP32EQ9BTT0 268 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 JMJD4Q9H9V9 463 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 CLDND1Q9NY35 253 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 ZSWIM5Q9P217 1185 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 ABCB11O95342 1321 aa11.55□□□□□ -0.56
CAPN1-210ENST00000527699 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-210ENST00000527699 STXBP3O00186 592 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-210ENST00000527699 KPNA6O60684 536 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 NBNO60934 754 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
CAPN1-210ENST00000527699 CKBP12277 381 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
CAPN1-210ENST00000527699 RFC2P35250 354 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 WDR5P61964 334 aaKnown RBP11.54□□□□□ -0.56
CAPN1-210ENST00000527699 HIC1Q14526 733 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 MFSD10Q14728 455 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 STXBP2Q15833 593 aa11.54□□□□□ -0.56
CAPN1-210ENST00000527699 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms