RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 MARCH6O60337 910 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 RBM5P52756 815 aaKnown RBP eCLIP19.53■□□□□ 0.72
USH1C-205ENST00000527020 BRD3Q15059 726 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 KIAA1328Q86T90 577 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 C2CD5Q86YS7 1000 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 IQCDQ96DY2 449 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 PURBQ96QR8 312 aaKnown RBP19.53■□□□□ 0.72
USH1C-205ENST00000527020 NT5C3AQ9H0P0 336 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 PANK4Q9NVE7 773 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 HDAC6Q9UBN7 1215 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 PLAGL2Q9UPG8 496 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 PCDHA2Q9Y5H9 948 aa19.53■□□□□ 0.72
USH1C-205ENST00000527020 POTEB3A0JP26 581 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 POTECB2RU33 542 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 ENC1O14682 589 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 NPM3O75607 178 aaKnown RBP19.52■□□□□ 0.72
USH1C-205ENST00000527020 FGFR1OPO95684 399 aaKnown RBP19.52■□□□□ 0.72
USH1C-205ENST00000527020 ATP1A1P05023 1023 aaKnown RBP19.52■□□□□ 0.72
USH1C-205ENST00000527020 SNAP25P60880 206 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 JAG1P78504 1218 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 CYP27A1Q02318 531 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 ICA1Q05084 483 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 POTEBQ6S5H4 581 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 MYOCDQ8IZQ8 938 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 FAM207AQ9NSI2 230 aaPredicted RBP19.52■□□□□ 0.72
USH1C-205ENST00000527020 ARHGAP20Q9P2F6 1191 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 KIAA1024Q9UPX6 916 aa19.52■□□□□ 0.72
USH1C-205ENST00000527020 GOLGB1Q14789 3259 aaKnown RBP19.52■□□□□ 0.72
USH1C-205ENST00000527020 CTAGE15A4D2H0 777 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 GDF11O95390 407 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 CTAGE8P0CG41 777 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 STAT3P40763 770 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 LONRF2Q1L5Z9 754 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 CTAGE6Q86UF2 777 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 CTAGE4Q8IX94 777 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 NOA1Q8NC60 698 aaKnown RBP19.51■□□□□ 0.71
USH1C-205ENST00000527020 DUSP10Q9Y6W6 482 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 ATAD5Q96QE3 1844 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 NPHP3-ACAD11A0A0J9YXS1 232 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 F5H6K3 240 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 ERCC3P19447 782 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 KLRC3Q07444 240 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 SPIRE1Q08AE8 756 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 FAM26FQ5R3K3 315 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 PAPD7Q5XG87 772 aaKnown RBP19.51■□□□□ 0.71
USH1C-205ENST00000527020 TMEM179Q6ZVK1 233 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
USH1C-205ENST00000527020 KRT86O43790 486 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 MED24O75448 989 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 PLA2G4BP0C869 781 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 TUBB4BP68371 445 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 MOXD1Q6UVY6 613 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 KRT26Q7Z3Y9 468 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 GMCL1P1Q8NEA9 526 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 ETNPPLQ8TBG4 499 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 HNRNPLLQ8WVV9 542 aaKnown RBP19.5■□□□□ 0.71
USH1C-205ENST00000527020 BAP1Q92560 729 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 NDUFB10O96000 172 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 APBA3O96018 575 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 SSBP05455 408 aaKnown RBP eCLIP19.5■□□□□ 0.71
USH1C-205ENST00000527020 CYP11B2P19099 503 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 ARHGAP4P98171 946 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 AP3B2Q13367 1082 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 STYK1Q6J9G0 422 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 CCDC155Q8N6L0 562 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 FLAD1Q8NFF5 587 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 TSG101Q99816 390 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 MMRN2Q9H8L6 949 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 TBC1D7Q9P0N9 293 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 MYH10P35580 1976 aa19.5■□□□□ 0.71
USH1C-205ENST00000527020 ATRNL1Q5VV63 1379 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 RHOXF2BP0C7M4 288 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 TAL1P17542 331 aaPredicted RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 VAV2P52735 878 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 KCNMA1Q12791 1236 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 RRP1BQ14684 758 aaKnown RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 ABCB5Q2M3G0 1257 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 ARSHQ5FYA8 562 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 BEND6Q5SZJ8 279 aaPredicted RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 LENG9Q96B70 501 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 GMCL1Q96IK5 515 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 RHOXF2Q9BQY4 288 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 MAP2K7O14733 419 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 SLC26A4O43511 780 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 SLC12A3P55017 1021 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 FKBP3Q00688 224 aaKnown RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 CACNB1Q02641 598 aaPredicted RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 GPBP1Q86WP2 473 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 EHBP1Q8NDI1 1231 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 CCDC42Q96M95 316 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
USH1C-205ENST00000527020 ZHX1Q9UKY1 873 aaPredicted RBP19.49■□□□□ 0.71
USH1C-205ENST00000527020 FRMD3A2A2Y4 597 aa19.48■□□□□ 0.71
USH1C-205ENST00000527020 SRGAP2O75044 1071 aa19.48■□□□□ 0.71
USH1C-205ENST00000527020 LCA5LO95447 670 aa19.48■□□□□ 0.71
USH1C-205ENST00000527020 MMP14P50281 582 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms