RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 POLR2DO15514 142 aaKnown RBP13.4□□□□□ -0.26
FGFR1-227ENST00000526570 SGSM2O43147 1006 aa13.4□□□□□ -0.26
FGFR1-227ENST00000526570 PTPN21Q16825 1174 aa13.4□□□□□ -0.26
FGFR1-227ENST00000526570 PPWD1Q96BP3 646 aaKnown RBP13.4□□□□□ -0.26
FGFR1-227ENST00000526570 SCNN1DP51172 638 aa13.4□□□□□ -0.26
FGFR1-227ENST00000526570 ARHGAP44Q17R89 818 aa13.4□□□□□ -0.26
FGFR1-227ENST00000526570 MRGBPQ9NV56 204 aa13.4□□□□□ -0.26
FGFR1-227ENST00000526570 FGFR1OP2Q9NVK5 253 aa13.4□□□□□ -0.26
FGFR1-227ENST00000526570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
FGFR1-227ENST00000526570 JAK2O60674 1132 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 CUTAO60888 179 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 VCAM1P19320 739 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 SERPINB4P48594 390 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 PPP2R5EQ16537 467 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 GLE1Q53GS7 698 aaKnown RBP13.39□□□□□ -0.27
FGFR1-227ENST00000526570 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
FGFR1-227ENST00000526570 BBOF1Q8ND07 529 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
FGFR1-227ENST00000526570 FHOD1Q9Y613 1164 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 EPB41L5Q9HCM4 733 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 ITGB3BPQ13352 177 aaPredicted RBP13.39□□□□□ -0.27
FGFR1-227ENST00000526570 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 SLC40A1Q9NP59 571 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 TEKT2Q9UIF3 430 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 HEG1Q9ULI3 1381 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 SOWAHDA6NJG2 315 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 KCNA3P22001 575 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 YY1P25490 414 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 DDIT3P35638 169 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 PUS3Q9BZE2 481 aaKnown RBP13.39□□□□□ -0.27
FGFR1-227ENST00000526570 TLK1Q9UKI8 766 aa13.39□□□□□ -0.27
FGFR1-227ENST00000526570 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 LRRC31Q6UY01 552 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 SRP68Q9UHB9 627 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 CAMSAP1Q5T5Y3 1602 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 SKAP2O75563 359 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 FAM200BP0CF97 657 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 PFKFB1P16118 471 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 MFN1Q8IWA4 741 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 SYCE1Q8N0S2 351 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 RNF217Q8TC41 542 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 MYL10Q9BUA6 226 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 KIFC3Q9BVG8 833 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 NOVA2Q9UNW9 492 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 A0A1B0GW55 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 SPOPO43791 374 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 E2F6O75461 281 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 HEXIM1O94992 359 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4L2P0CJ85 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4L3P0CJ86 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4L4P0CJ87 422 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4L5P0CJ88 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4L6P0CJ89 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4L7P0CJ90 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 TMC5Q6UXY8 1006 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 KRT12Q99456 494 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 PLIN2Q99541 437 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 GID8Q9NWU2 228 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DUX4Q9UBX2 424 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 GMNCA6NCL1 334 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 LETM2Q2VYF4 491 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 DPH5Q9H2P9 285 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 VPS37BQ9H9H4 285 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 WARS2Q9UGM6 360 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 EPN1Q9Y6I3 576 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 A0A087WWV3 80 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 CRCPO75575 148 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 HDAC4P56524 1084 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 CUL4AQ13619 759 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 STMN3Q9NZ72 180 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 LCMT1Q9UIC8 334 aa13.38□□□□□ -0.27
FGFR1-227ENST00000526570 COPG1Q9Y678 874 aaKnown RBP13.38□□□□□ -0.27
FGFR1-227ENST00000526570 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 MAPK13O15264 365 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 KRT3P12035 628 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 RAPGEF1Q13905 1077 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 ZNF174Q15697 407 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 DPCR1Q3MIW9 517 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 ARHGEF18Q6ZSZ5 1173 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 LONP2Q86WA8 852 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
FGFR1-227ENST00000526570 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms