RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SYT8Q8NBV8 401 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 MRPL4Q9BYD3 311 aaKnown RBP6.27□□□□□ -1.41
CSDE1-211ENST00000525970 SLC52A1Q9NWF4 448 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 MAPRE3Q9UPY8 281 aa6.27□□□□□ -1.41
CSDE1-211ENST00000525970 THRAP3Q9Y2W1 955 aaKnown RBP6.27□□□□□ -1.41
CSDE1-211ENST00000525970 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 AGRPO00253 132 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 FGF10O15520 208 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 PDE8AO60658 829 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 RAPGEF3O95398 923 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 ITGAVP06756 1048 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 FGFR1P11362 822 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 PMLP29590 882 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 NCKAP1LP55160 1127 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 EVA1CP58658 441 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 KRTAP10-2P60368 255 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 PPP2R2AP63151 447 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 NFKB2Q00653 900 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 EXOSC10Q01780 885 aaKnown RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 HSP90AA2PQ14568 343 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 BRDTQ58F21 947 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 TRIM61Q5EBN2 209 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 EEF1DP3Q658K8 133 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 PAQR3Q6TCH7 311 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 FERMT3Q86UX7 667 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 AFAP1L2Q8N4X5 818 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 PTCHD1Q96NR3 888 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 AARSD1Q9BTE6 412 aaKnown RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 INTS7Q9NVH2 962 aaKnown RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 G3BP2Q9UN86 482 aaKnown RBP6.26□□□□□ -1.41
CSDE1-211ENST00000525970 BACE2Q9Y5Z0 518 aa6.26□□□□□ -1.41
CSDE1-211ENST00000525970 FFAR3O14843 346 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 DBHP09172 617 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 SDSP20132 328 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 SOX5P35711 763 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 KCNC1P48547 511 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 CORO7P57737 925 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 ZNF200P98182 395 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-211ENST00000525970 SPATS1Q496A3 300 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 RCSD1Q6JBY9 416 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 ZNF227Q86WZ6 799 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 TRIM59Q8IWR1 403 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 OSBP2Q969R2 916 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 MRGPRX3Q96LB0 322 aa6.25□□□□□ -1.41
CSDE1-211ENST00000525970 TARS2Q9BW92 718 aaKnown RBP6.25□□□□□ -1.41
CSDE1-211ENST00000525970 CNOT11Q9UKZ1 510 aaKnown RBP6.25□□□□□ -1.41
CSDE1-211ENST00000525970 EYA4O95677 639 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 C6orf222P0C671 652 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-211ENST00000525970 MSL3P1P0C860 447 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 FBLN1P23142 703 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 CNGA1P29973 690 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 GRIA2P42262 883 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 SCRN1Q12765 414 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 EFEMP1Q12805 493 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 HSP90AB2PQ58FF8 381 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 ODR4Q5SWX8 454 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 ZFYVE27Q5T4F4 411 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 GTF2IRD2BQ6EKJ0 949 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 GTF2IRD2Q86UP8 949 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 JDP2Q8WYK2 163 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 RNF38Q9H0F5 515 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 ADAM7Q9H2U9 754 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 TRIM39Q9HCM9 518 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 PDLIM7Q9NR12 457 aa6.24□□□□□ -1.41
CSDE1-211ENST00000525970 A0A1W2PQJ5 194 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 ALG1L2C9J202 215 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 PABPC1P11940 636 aaKnown RBP6.23□□□□□ -1.41
CSDE1-211ENST00000525970 PAMP19021 973 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 POU3F2P20265 443 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-211ENST00000525970 LIMS1P48059 325 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 SLURP1P55000 103 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 SUMO1P63165 101 aaKnown RBP6.23□□□□□ -1.41
CSDE1-211ENST00000525970 LRRTM3Q86VH5 581 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 NLGN2Q8NFZ4 835 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 BTN2A2Q8WVV5 523 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 DDX1Q92499 740 aaKnown RBP6.23□□□□□ -1.41
CSDE1-211ENST00000525970 CDC6Q99741 560 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 NKX2-4Q9H2Z4 354 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 GPRC5CQ9NQ84 441 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 CYP26B1Q9NR63 512 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 MAGEC2Q9UBF1 373 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-211ENST00000525970 WASHC2CQ9Y4E1 1318 aa6.23□□□□□ -1.41
CSDE1-211ENST00000525970 NPHP3-ACAD11A0A0J9YXS1 232 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 TBX1O43435 398 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 DNAJC8O75937 253 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-211ENST00000525970 SNRPB2P08579 225 aaKnown RBP6.22□□□□□ -1.41
CSDE1-211ENST00000525970 ECI1P42126 302 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 KCNJ6P48051 423 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 PLP2Q04941 152 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 CPNE8Q86YQ8 564 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 FMNL3Q8IVF7 1028 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 RAVER1Q8IY67 606 aaKnown RBP6.22□□□□□ -1.41
CSDE1-211ENST00000525970 UBR7Q8N806 425 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 GSTCDQ8NEC7 633 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 CLEC1BQ9P126 229 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 MCM8Q9UJA3 840 aa6.22□□□□□ -1.41
CSDE1-211ENST00000525970 TRBV23OR9-2A0A075B6M9 112 aa6.21□□□□□ -1.42
CSDE1-211ENST00000525970 PRODHO43272 600 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms